Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69695.1 | ABK71789.1 | MSMEG_1491 | MSMEG_6330 | Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155. | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | 0.966 |
| ABK69695.1 | ABK75279.1 | MSMEG_1491 | MSMEG_3442 | Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155. | Cyclohexadienyl dehydratase; Identified by match to protein family HMM PF00497. | 0.908 |
| ABK69695.1 | hisC | MSMEG_1491 | MSMEG_3206 | Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155. | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.921 |
| ABK69695.1 | hisC-2 | MSMEG_1491 | MSMEG_6351 | Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155. | Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.919 |
| ABK69695.1 | pheA | MSMEG_1491 | MSMEG_6418 | Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155. | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842. | 0.922 |
| ABK71789.1 | ABK69695.1 | MSMEG_6330 | MSMEG_1491 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155. | 0.966 |
| ABK71789.1 | ABK71866.1 | MSMEG_6330 | MSMEG_5536 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.965 |
| ABK71789.1 | ABK74300.1 | MSMEG_6330 | MSMEG_2111 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. May play some role in the pathogenicity. | 0.952 |
| ABK71789.1 | ABK75279.1 | MSMEG_6330 | MSMEG_3442 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Cyclohexadienyl dehydratase; Identified by match to protein family HMM PF00497. | 0.919 |
| ABK71789.1 | hisC | MSMEG_6330 | MSMEG_3206 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.965 |
| ABK71789.1 | hisC-2 | MSMEG_6330 | MSMEG_6351 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.966 |
| ABK71789.1 | pheA | MSMEG_6330 | MSMEG_6418 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842. | 0.989 |
| ABK71866.1 | ABK71789.1 | MSMEG_5536 | MSMEG_6330 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | 0.965 |
| ABK71866.1 | ABK74300.1 | MSMEG_5536 | MSMEG_2111 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. May play some role in the pathogenicity. | 0.941 |
| ABK71866.1 | ABK75279.1 | MSMEG_5536 | MSMEG_3442 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Cyclohexadienyl dehydratase; Identified by match to protein family HMM PF00497. | 0.908 |
| ABK71866.1 | pheA | MSMEG_5536 | MSMEG_6418 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842. | 0.934 |
| ABK71959.1 | ABK75279.1 | MSMEG_2725 | MSMEG_3442 | Glutamate transporter permease protein GluD; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Cyclohexadienyl dehydratase; Identified by match to protein family HMM PF00497. | 0.853 |
| ABK71959.1 | ABK75885.1 | MSMEG_2725 | MSMEG_2726 | Glutamate transporter permease protein GluD; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Glutamate permease; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.992 |
| ABK71959.1 | ehuC | MSMEG_2725 | MSMEG_3548 | Glutamate transporter permease protein GluD; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004. | 0.530 |
| ABK74300.1 | ABK71789.1 | MSMEG_2111 | MSMEG_6330 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. May play some role in the pathogenicity. | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153. | 0.952 |
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