Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69556.1 | ABK69740.1 | MSMEG_3457 | MSMEG_4260 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Cytochrome c oxidase subunit 3; Identified by match to protein family HMM PF00510. | 0.472 |
| ABK69556.1 | ABK70538.1 | MSMEG_3457 | MSMEG_3456 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Hydroxylaminobenzene mutase. | 0.497 |
| ABK69556.1 | ABK70782.1 | MSMEG_3457 | MSMEG_6530 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | 0.549 |
| ABK69556.1 | ABK71651.1 | MSMEG_3457 | MSMEG_3458 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Conserved hypothetical protein. | 0.595 |
| ABK69556.1 | ABK73923.1 | MSMEG_3457 | MSMEG_0848 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | 0.469 |
| ABK69556.1 | ABK75613.1 | MSMEG_3457 | MSMEG_5443 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.545 |
| ABK69556.1 | ABK75942.1 | MSMEG_3457 | MSMEG_4262 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355. | 0.522 |
| ABK69556.1 | cyoE | MSMEG_3457 | MSMEG_3105 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.494 |
| ABK69556.1 | ppa | MSMEG_3457 | MSMEG_6114 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.481 |
| ABK69556.1 | rpoA | MSMEG_3457 | MSMEG_1524 | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.479 |
| ABK69740.1 | ABK69556.1 | MSMEG_4260 | MSMEG_3457 | Cytochrome c oxidase subunit 3; Identified by match to protein family HMM PF00510. | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | 0.472 |
| ABK69740.1 | ABK75942.1 | MSMEG_4260 | MSMEG_4262 | Cytochrome c oxidase subunit 3; Identified by match to protein family HMM PF00510. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355. | 0.999 |
| ABK69740.1 | cyoE | MSMEG_4260 | MSMEG_3105 | Cytochrome c oxidase subunit 3; Identified by match to protein family HMM PF00510. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.998 |
| ABK70538.1 | ABK69556.1 | MSMEG_3456 | MSMEG_3457 | Hydroxylaminobenzene mutase. | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | 0.497 |
| ABK70782.1 | ABK69556.1 | MSMEG_6530 | MSMEG_3457 | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | 0.549 |
| ABK70782.1 | ABK75942.1 | MSMEG_6530 | MSMEG_4262 | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355. | 0.994 |
| ABK70782.1 | cyoE | MSMEG_6530 | MSMEG_3105 | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.943 |
| ABK71651.1 | ABK69556.1 | MSMEG_3458 | MSMEG_3457 | Conserved hypothetical protein. | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | 0.595 |
| ABK73923.1 | ABK69556.1 | MSMEG_0848 | MSMEG_3457 | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992. | 0.469 |
| ABK73923.1 | ABK75613.1 | MSMEG_0848 | MSMEG_5443 | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.468 |
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