STRINGSTRING
ABK69608.1 ABK69608.1 ABK74499.1 ABK74499.1 ABK69907.1 ABK69907.1 FecE FecE ABK75046.1 ABK75046.1 ABK72739.1 ABK72739.1 ABK75424.1 ABK75424.1 ABK74342.1 ABK74342.1 ABK72487.1 ABK72487.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69608.1Hypothetical protein; Identified by Glimmer2; putative. (55 aa)    
Predicted Functional Partners:
ABK74499.1
GatB/Yqey domain protein; Identified by match to protein family HMM PF02637.
   
  
 0.593
ABK69907.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF02641.
   
  
 0.588
FecE
Ferric enterobactin transport ATP-binding protein FepC; Identified by match to protein family HMM PF00005.
   
  
 0.585
ABK75046.1
Conserved hypothetical protein.
      
 0.585
ABK72739.1
FAD-binding 9, siderophore-interacting; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021.
      
 0.581
ABK75424.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501.
  
    0.575
ABK74342.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
  
    0.571
ABK72487.1
Alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
  
    0.432
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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