STRINGSTRING
ABK72616.1 ABK72616.1 ABK72725.1 ABK72725.1 ABK76080.1 ABK76080.1 eccE1 eccE1 ABK69833.1 ABK69833.1 ABK71110.1 ABK71110.1 ABK74693.1 ABK74693.1 ABK75511.1 ABK75511.1 eccB1 eccB1 ABK70832.1 ABK70832.1 ABK75842.1 ABK75842.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72616.1Probable conserved integral membrane protein; Identified by match to protein family HMM PF02517. (216 aa)    
Predicted Functional Partners:
ABK72725.1
Conserved hypothetical protein.
 
    0.745
ABK76080.1
Probable conserved transmembrane protein; Identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958.
  
    0.742
eccE1
Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in at least a donor strain.
  
    0.734
ABK69833.1
Conserved hypothetical protein.
 
    0.723
ABK71110.1
Conserved hypothetical protein.
  
    0.703
ABK74693.1
Conserved hypothetical protein.
  
    0.680
ABK75511.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04167.
  
    0.653
eccB1
Conserved hypothetical protein; An ATPase (shown for residues 72-479). Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in both donor and recipient strains ; Belongs to the EccB family.
 
  
 0.646
ABK70832.1
Tuberculin related peptide.
  
    0.641
ABK75842.1
Conserved hypothetical protein.
  
    0.629
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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