STRINGSTRING
ABK73508.1 ABK73508.1 ABK73473.1 ABK73473.1 ABK74850.1 ABK74850.1 ABK73530.1 ABK73530.1 ABK75266.1 ABK75266.1 ABK71850.1 ABK71850.1 ABK73236.1 ABK73236.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73508.1Conserved hypothetical protein; Identified by match to protein family HMM PF03883; Belongs to the UPF0246 family. (248 aa)    
Predicted Functional Partners:
ABK73473.1
Transmembrane transport protein; Identified by match to protein family HMM PF07690.
 
    0.799
ABK74850.1
Conserved hypothetical protein.
  
    0.631
ABK73530.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.466
ABK75266.1
Integral membrane protein.
  
    0.448
ABK71850.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.423
ABK73236.1
Conserved hypothetical protein.
 
    0.408
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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