Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69959.1 | ABK73183.1 | MSMEG_1403 | MSMEG_3509 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.622 |
ABK69959.1 | ABK73376.1 | MSMEG_1403 | MSMEG_0090 | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | Conserved hypothetical protein. | 0.671 |
ABK71451.1 | ABK73183.1 | MSMEG_3508 | MSMEG_3509 | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | Conserved hypothetical protein. | 0.606 |
ABK71451.1 | ABK73360.1 | MSMEG_3508 | MSMEG_3507 | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | Fructose-bisphosphate aldolase class-I; Identified by match to protein family HMM PF00274. | 0.725 |
ABK71451.1 | ABK74725.1 | MSMEG_3508 | MSMEG_3511 | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | Hydroxylase; Identified by match to protein family HMM PF01494. | 0.428 |
ABK73183.1 | ABK69959.1 | MSMEG_3509 | MSMEG_1403 | Conserved hypothetical protein. | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | 0.622 |
ABK73183.1 | ABK71451.1 | MSMEG_3509 | MSMEG_3508 | Conserved hypothetical protein. | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | 0.606 |
ABK73183.1 | ABK73360.1 | MSMEG_3509 | MSMEG_3507 | Conserved hypothetical protein. | Fructose-bisphosphate aldolase class-I; Identified by match to protein family HMM PF00274. | 0.523 |
ABK73183.1 | ABK73376.1 | MSMEG_3509 | MSMEG_0090 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.492 |
ABK73183.1 | ABK74532.1 | MSMEG_3509 | MSMEG_1275 | Conserved hypothetical protein. | HNH nuclease, putative. | 0.608 |
ABK73183.1 | ABK74725.1 | MSMEG_3509 | MSMEG_3511 | Conserved hypothetical protein. | Hydroxylase; Identified by match to protein family HMM PF01494. | 0.549 |
ABK73183.1 | ABK75141.1 | MSMEG_3509 | MSMEG_1417 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00903. | 0.607 |
ABK73183.1 | ABK75173.1 | MSMEG_3509 | MSMEG_1078 | Conserved hypothetical protein. | Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. | 0.512 |
ABK73183.1 | ABK75300.1 | MSMEG_3509 | MSMEG_2922 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.688 |
ABK73183.1 | ABK76165.1 | MSMEG_3509 | MSMEG_1385 | Conserved hypothetical protein. | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | 0.506 |
ABK73360.1 | ABK71451.1 | MSMEG_3507 | MSMEG_3508 | Fructose-bisphosphate aldolase class-I; Identified by match to protein family HMM PF00274. | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | 0.725 |
ABK73360.1 | ABK73183.1 | MSMEG_3507 | MSMEG_3509 | Fructose-bisphosphate aldolase class-I; Identified by match to protein family HMM PF00274. | Conserved hypothetical protein. | 0.523 |
ABK73376.1 | ABK69959.1 | MSMEG_0090 | MSMEG_1403 | Conserved hypothetical protein. | Cutinase superfamily protein; Identified by match to protein family HMM PF01083. | 0.671 |
ABK73376.1 | ABK73183.1 | MSMEG_0090 | MSMEG_3509 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.492 |
ABK74532.1 | ABK73183.1 | MSMEG_1275 | MSMEG_3509 | HNH nuclease, putative. | Conserved hypothetical protein. | 0.608 |
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