STRINGSTRING
ABK73183.1 ABK73183.1 ABK75300.1 ABK75300.1 ABK69959.1 ABK69959.1 ABK74532.1 ABK74532.1 ABK75141.1 ABK75141.1 ABK71451.1 ABK71451.1 ABK74725.1 ABK74725.1 ABK73360.1 ABK73360.1 ABK75173.1 ABK75173.1 ABK76165.1 ABK76165.1 ABK73376.1 ABK73376.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73183.1Conserved hypothetical protein. (217 aa)    
Predicted Functional Partners:
ABK75300.1
Conserved hypothetical protein.
 
    0.688
ABK69959.1
Cutinase superfamily protein; Identified by match to protein family HMM PF01083.
  
    0.622
ABK74532.1
HNH nuclease, putative.
  
    0.608
ABK75141.1
Identified by match to protein family HMM PF00903.
 
    0.607
ABK71451.1
Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561.
  
  
 0.606
ABK74725.1
Hydroxylase; Identified by match to protein family HMM PF01494.
  
    0.549
ABK73360.1
Fructose-bisphosphate aldolase class-I; Identified by match to protein family HMM PF00274.
  
    0.523
ABK75173.1
Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
 
   0.512
ABK76165.1
PAP2 superfamily protein; Identified by match to protein family HMM PF01569.
 
    0.506
ABK73376.1
Conserved hypothetical protein.
 
  
 0.492
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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