Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70835.1 | ABK71145.1 | MSMEG_3525 | MSMEG_3529 | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | 0.474 |
| ABK70835.1 | ABK72277.1 | MSMEG_3525 | MSMEG_3523 | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | Probable membrane protein. | 0.579 |
| ABK70835.1 | ABK72657.1 | MSMEG_3525 | MSMEG_3527 | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.515 |
| ABK70835.1 | ABK73754.1 | MSMEG_3525 | MSMEG_3526 | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.566 |
| ABK71145.1 | ABK70835.1 | MSMEG_3529 | MSMEG_3525 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | 0.474 |
| ABK71145.1 | ABK72657.1 | MSMEG_3529 | MSMEG_3527 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.957 |
| ABK71145.1 | ABK73754.1 | MSMEG_3529 | MSMEG_3526 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.619 |
| ABK72277.1 | ABK70835.1 | MSMEG_3523 | MSMEG_3525 | Probable membrane protein. | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | 0.579 |
| ABK72277.1 | ABK73754.1 | MSMEG_3523 | MSMEG_3526 | Probable membrane protein. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.416 |
| ABK72311.1 | ABK73754.1 | MSMEG_1594 | MSMEG_3526 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.511 |
| ABK72657.1 | ABK70835.1 | MSMEG_3527 | MSMEG_3525 | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | 0.515 |
| ABK72657.1 | ABK71145.1 | MSMEG_3527 | MSMEG_3529 | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | 0.957 |
| ABK72657.1 | ABK73754.1 | MSMEG_3527 | MSMEG_3526 | Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.608 |
| ABK73179.1 | ABK73754.1 | MSMEG_5100 | MSMEG_3526 | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.638 |
| ABK73179.1 | cysNC | MSMEG_5100 | MSMEG_4978 | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558. | Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.705 |
| ABK73669.1 | ABK73754.1 | MSMEG_4891 | MSMEG_3526 | Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...] | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | 0.431 |
| ABK73669.1 | cysNC | MSMEG_4891 | MSMEG_4978 | Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...] | Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.440 |
| ABK73754.1 | ABK70835.1 | MSMEG_3526 | MSMEG_3525 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | 0.566 |
| ABK73754.1 | ABK71145.1 | MSMEG_3526 | MSMEG_3529 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | 0.619 |
| ABK73754.1 | ABK72277.1 | MSMEG_3526 | MSMEG_3523 | Conserved hypothetical protein; Identified by match to protein family HMM TIGR01926. | Probable membrane protein. | 0.416 |
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