Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK73549.1 | ABK74584.1 | MSMEG_4521 | MSMEG_3530 | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | Conserved hypothetical protein. | 0.420 |
ABK73755.1 | ABK74584.1 | MSMEG_6457 | MSMEG_3530 | Oxidoreductase molybdopterin binding domain, putative; Identified by match to protein family HMM PF00174. | Conserved hypothetical protein. | 0.443 |
ABK74070.1 | ABK74584.1 | MSMEG_3533 | MSMEG_3530 | Di-/tripeptide transporter; Identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924. | Conserved hypothetical protein. | 0.483 |
ABK74070.1 | ABK75545.1 | MSMEG_3533 | MSMEG_3531 | Di-/tripeptide transporter; Identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924. | Conserved hypothetical protein. | 0.541 |
ABK74584.1 | ABK73549.1 | MSMEG_3530 | MSMEG_4521 | Conserved hypothetical protein. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.420 |
ABK74584.1 | ABK73755.1 | MSMEG_3530 | MSMEG_6457 | Conserved hypothetical protein. | Oxidoreductase molybdopterin binding domain, putative; Identified by match to protein family HMM PF00174. | 0.443 |
ABK74584.1 | ABK74070.1 | MSMEG_3530 | MSMEG_3533 | Conserved hypothetical protein. | Di-/tripeptide transporter; Identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924. | 0.483 |
ABK74584.1 | ABK75348.1 | MSMEG_3530 | MSMEG_3528 | Conserved hypothetical protein. | Identified by match to protein family HMM PF03734. | 0.505 |
ABK74584.1 | ABK75545.1 | MSMEG_3530 | MSMEG_3531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.709 |
ABK75348.1 | ABK74584.1 | MSMEG_3528 | MSMEG_3530 | Identified by match to protein family HMM PF03734. | Conserved hypothetical protein. | 0.505 |
ABK75348.1 | ABK75545.1 | MSMEG_3528 | MSMEG_3531 | Identified by match to protein family HMM PF03734. | Conserved hypothetical protein. | 0.504 |
ABK75545.1 | ABK74070.1 | MSMEG_3531 | MSMEG_3533 | Conserved hypothetical protein. | Di-/tripeptide transporter; Identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924. | 0.541 |
ABK75545.1 | ABK74584.1 | MSMEG_3531 | MSMEG_3530 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.709 |
ABK75545.1 | ABK75348.1 | MSMEG_3531 | MSMEG_3528 | Conserved hypothetical protein. | Identified by match to protein family HMM PF03734. | 0.504 |