STRINGSTRING
ABK72234.1 ABK72234.1 ABK73354.1 ABK73354.1 ABK70033.1 ABK70033.1 ABK74541.1 ABK74541.1 hydA hydA ABK73643.1 ABK73643.1 ABK73215.1 ABK73215.1 ABK70209.1 ABK70209.1 ABK75477.1 ABK75477.1 ABK74148.1 ABK74148.1 ABK71989.1 ABK71989.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72234.1Conserved hypothetical protein. (406 aa)    
Predicted Functional Partners:
ABK73354.1
Conserved hypothetical protein.
  
     0.601
ABK70033.1
Tetratricopeptide repeat domain protein.
  
    0.525
ABK74541.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.523
hydA
Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033.
  
  
 0.499
ABK73643.1
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.498
ABK73215.1
N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879.
 
  
 0.485
ABK70209.1
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.466
ABK75477.1
N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879.
 
  
 0.459
ABK74148.1
N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879.
 
  
 0.458
ABK71989.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.452
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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