Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69967.1 | ABK70675.1 | MSMEG_3923 | MSMEG_3560 | Conserved hypothetical protein; Identified by match to protein family HMM PF04978. | Conserved hypothetical protein. | 0.610 |
ABK70675.1 | ABK69967.1 | MSMEG_3560 | MSMEG_3923 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF04978. | 0.610 |
ABK70675.1 | ABK71565.1 | MSMEG_3560 | MSMEG_4688 | Conserved hypothetical protein. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | 0.409 |
ABK70675.1 | glnA | MSMEG_3560 | MSMEG_3561 | Conserved hypothetical protein. | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.664 |
ABK70675.1 | pcaC-4 | MSMEG_3560 | MSMEG_3562 | Conserved hypothetical protein. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.576 |
ABK71565.1 | ABK70675.1 | MSMEG_4688 | MSMEG_3560 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF01323. | Conserved hypothetical protein. | 0.409 |
glnA | ABK70675.1 | MSMEG_3561 | MSMEG_3560 | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Conserved hypothetical protein. | 0.664 |
glnA | pcaC-4 | MSMEG_3561 | MSMEG_3562 | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | 0.834 |
pcaC-4 | ABK70675.1 | MSMEG_3562 | MSMEG_3560 | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | Conserved hypothetical protein. | 0.576 |
pcaC-4 | glnA | MSMEG_3562 | MSMEG_3561 | 4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. | Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.834 |