STRINGSTRING
ABK73302.1 ABK73302.1 ABK71516.1 ABK71516.1 ABK72621.1 ABK72621.1 ABK72667.1 ABK72667.1 glnA glnA bfr bfr pcaC-4 pcaC-4 galK galK ABK76030.1 ABK76030.1 ABK72388.1 ABK72388.1 ABK74529.1 ABK74529.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK73302.1Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. (686 aa)    
Predicted Functional Partners:
ABK71516.1
Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
  
  
 0.833
ABK72621.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04296.
      
 0.820
ABK72667.1
Major facilitator superfamily protein MFS_1; Probably plays a role in bacterial growth and resistance to antibiotics.
   
  
 0.818
glnA
Glutamine synthetase, catalytic domain; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
 
  
 0.773
bfr
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
 0.769
pcaC-4
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
  
    0.755
galK
Galactokinase; Identified by match to protein family HMM PF00288; match to protein family HMM TIGR00131; Belongs to the GHMP kinase family. GalK subfamily.
   
  
 0.600
ABK76030.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
  
    0.558
ABK72388.1
Hypothetical ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021.
  
  
 0.548
ABK74529.1
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
  
  
 0.543
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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