Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70263.1 | ABK70524.1 | MSMEG_3060 | MSMEG_3404 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.730 |
ABK70263.1 | ABK72203.1 | MSMEG_3060 | MSMEG_6071 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | 0.529 |
ABK70263.1 | ABK74751.1 | MSMEG_3060 | MSMEG_3569 | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | Conserved hypothetical protein. | 0.580 |
ABK70524.1 | ABK70263.1 | MSMEG_3404 | MSMEG_3060 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | 0.730 |
ABK70524.1 | ABK72203.1 | MSMEG_3404 | MSMEG_6071 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | 0.648 |
ABK70524.1 | ABK73177.1 | MSMEG_3404 | MSMEG_0625 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.615 |
ABK70524.1 | ABK74751.1 | MSMEG_3404 | MSMEG_3569 | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | Conserved hypothetical protein. | 0.586 |
ABK71079.1 | ABK72141.1 | MSMEG_6140 | MSMEG_0605 | Membrane protein. | Conserved hypothetical protein. | 0.459 |
ABK71079.1 | ABK74751.1 | MSMEG_6140 | MSMEG_3569 | Membrane protein. | Conserved hypothetical protein. | 0.641 |
ABK72141.1 | ABK71079.1 | MSMEG_0605 | MSMEG_6140 | Conserved hypothetical protein. | Membrane protein. | 0.459 |
ABK72141.1 | ABK72203.1 | MSMEG_0605 | MSMEG_6071 | Conserved hypothetical protein. | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | 0.433 |
ABK72141.1 | ABK72706.1 | MSMEG_0605 | MSMEG_0606 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.910 |
ABK72141.1 | ABK74751.1 | MSMEG_0605 | MSMEG_3569 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.622 |
ABK72203.1 | ABK70263.1 | MSMEG_6071 | MSMEG_3060 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein; Identified by match to protein family HMM PF07947. | 0.529 |
ABK72203.1 | ABK70524.1 | MSMEG_6071 | MSMEG_3404 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | HNH endonuclease domain protein; Identified by match to protein family HMM PF01844. | 0.648 |
ABK72203.1 | ABK72141.1 | MSMEG_6071 | MSMEG_0605 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.433 |
ABK72203.1 | ABK72706.1 | MSMEG_6071 | MSMEG_0606 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.445 |
ABK72203.1 | ABK73177.1 | MSMEG_6071 | MSMEG_0625 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.521 |
ABK72203.1 | ABK74751.1 | MSMEG_6071 | MSMEG_3569 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.702 |
ABK72706.1 | ABK72141.1 | MSMEG_0606 | MSMEG_0605 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.910 |
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