Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71197.1 | ABK72367.1 | MSMEG_3596 | MSMEG_3588 | ATPase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.423 |
ABK71197.1 | ABK72394.1 | MSMEG_3596 | MSMEG_3589 | ATPase. | Conserved hypothetical protein. | 0.455 |
ABK71197.1 | ABK72449.1 | MSMEG_3596 | MSMEG_3591 | ATPase. | Conserved hypothetical protein. | 0.473 |
ABK71197.1 | ABK73365.1 | MSMEG_3596 | MSMEG_3592 | ATPase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.494 |
ABK71197.1 | ABK73760.1 | MSMEG_3596 | MSMEG_3595 | ATPase. | Conserved hypothetical protein. | 0.957 |
ABK71197.1 | ABK75032.1 | MSMEG_3596 | MSMEG_3593 | ATPase. | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | 0.513 |
ABK71197.1 | ABK75271.1 | MSMEG_3596 | MSMEG_3590 | ATPase. | Conserved hypothetical protein. | 0.480 |
ABK71197.1 | ABK75755.1 | MSMEG_3596 | MSMEG_3594 | ATPase. | Anthranilate dioxygenase reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.481 |
ABK72367.1 | ABK71197.1 | MSMEG_3588 | MSMEG_3596 | Hypothetical protein; Identified by Glimmer2; putative. | ATPase. | 0.423 |
ABK72367.1 | ABK72394.1 | MSMEG_3588 | MSMEG_3589 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.695 |
ABK72367.1 | ABK72449.1 | MSMEG_3588 | MSMEG_3591 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.695 |
ABK72367.1 | ABK73365.1 | MSMEG_3588 | MSMEG_3592 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.676 |
ABK72367.1 | ABK73760.1 | MSMEG_3588 | MSMEG_3595 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.419 |
ABK72367.1 | ABK75032.1 | MSMEG_3588 | MSMEG_3593 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF01904. | 0.675 |
ABK72367.1 | ABK75271.1 | MSMEG_3588 | MSMEG_3590 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.696 |
ABK72367.1 | ABK75755.1 | MSMEG_3588 | MSMEG_3594 | Hypothetical protein; Identified by Glimmer2; putative. | Anthranilate dioxygenase reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.657 |
ABK72367.1 | ABK75839.1 | MSMEG_3588 | MSMEG_3587 | Hypothetical protein; Identified by Glimmer2; putative. | D-serine/D-alanine/glycine transporter; Identified by match to protein family HMM PF00324. | 0.617 |
ABK72394.1 | ABK71197.1 | MSMEG_3589 | MSMEG_3596 | Conserved hypothetical protein. | ATPase. | 0.455 |
ABK72394.1 | ABK72367.1 | MSMEG_3589 | MSMEG_3588 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.695 |
ABK72394.1 | ABK72449.1 | MSMEG_3589 | MSMEG_3591 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.789 |
page 1 of 5