STRINGSTRING
ABK75032.1 ABK75032.1 ABK73365.1 ABK73365.1 ABK75755.1 ABK75755.1 ABK72449.1 ABK72449.1 ABK75271.1 ABK75271.1 ABK72394.1 ABK72394.1 ABK72367.1 ABK72367.1 lon lon ABK75839.1 ABK75839.1 ABK72403.1 ABK72403.1 ABK71197.1 ABK71197.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75032.1Conserved hypothetical protein; Identified by match to protein family HMM PF01904. (242 aa)    
Predicted Functional Partners:
ABK73365.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.790
ABK75755.1
Anthranilate dioxygenase reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
  
    0.784
ABK72449.1
Conserved hypothetical protein.
  
    0.765
ABK75271.1
Conserved hypothetical protein.
  
    0.760
ABK72394.1
Conserved hypothetical protein.
  
    0.755
ABK72367.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.675
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
    0.559
ABK75839.1
D-serine/D-alanine/glycine transporter; Identified by match to protein family HMM PF00324.
  
    0.540
ABK72403.1
PHP domain protein; Identified by match to protein family HMM PF02811.
 
    0.520
ABK71197.1
ATPase.
  
    0.513
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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