STRINGSTRING
ABK73584.1 ABK73584.1 ABK75952.1 ABK75952.1 ABK72879.1 ABK72879.1 glcB glcB ABK74007.1 ABK74007.1 whiB7 whiB7 ABK75085.1 ABK75085.1 gnd gnd ybeY ybeY ABK74721.1 ABK74721.1 ABK70741.1 ABK70741.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73584.1CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595. (364 aa)    
Predicted Functional Partners:
ABK75952.1
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
 
  
0.979
ABK72879.1
Conserved hypothetical protein.
  
    0.897
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
    0.765
ABK74007.1
Conserved hypothetical protein.
  
    0.635
whiB7
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (By similarity). Participates in maintaining a reduced cytoplasmic (MSH/MSSM) environment under normal growth conditions and directly or indirectly controls the concentration of mycothiol (MSH + MSSM).
   
  
 0.590
ABK75085.1
CBS domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
 
   
0.582
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.580
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
  
 0.570
ABK74721.1
Identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01303.
  
  
 0.527
ABK70741.1
Identified by match to protein family HMM PF00013; match to protein family HMM PF02562.
  
  
 0.485
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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