STRINGSTRING
ABK72025.1 ABK72025.1 ABK74790.1 ABK74790.1 ABK73264.1 ABK73264.1 gcvH gcvH ABK71385.1 ABK71385.1 ABK70991.1 ABK70991.1 pgsA pgsA ABK71746.1 ABK71746.1 secA2 secA2 disA disA pgsA-2 pgsA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72025.1Conserved hypothetical protein; Identified by match to protein family HMM PF05949. (277 aa)    
Predicted Functional Partners:
ABK74790.1
Integral membrane protein; Identified by match to protein family HMM PF06947.
 
  
 0.980
ABK73264.1
Membrane associated protein; Identified by match to protein family HMM PF05949.
 
  
 0.957
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
    0.866
ABK71385.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05949.
  
    0.776
ABK70991.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02577.
     
 0.743
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.602
ABK71746.1
CDP-diacylglycerol-glycerol-3-phosphate; Identified by match to protein family HMM PF01066.
  
  
 0.584
secA2
ATPase SecA2; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
  
    0.554
disA
Conserved hypothetical protein; Participates in a DNA-damage check-point. DisA forms globular foci that rapidly scan along the chromosomes searching for lesions. Belongs to the DisA family.
  
    0.550
pgsA-2
Phosphatidylinositol synthase; Catalyzes the conjugation of the 1'-hydroxyl group of D-myo- inositol-3-phosphate (also named L-myo-inositol-1-phosphate) with a lipid tail of cytidine diphosphate diacylglycerol (CDP-DAG), forming phosphatidylinositol phosphate (PIP) and CMP. PIP is a precursor of phosphatidylinositol (PI) which is an essential lipid for mycobacteria required for formation of their cell wall. Is essential to the survival of M.smegmatis. Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.543
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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