STRINGSTRING
ABK73264.1 ABK73264.1 ABK74790.1 ABK74790.1 ABK72025.1 ABK72025.1 gcvH gcvH ABK70991.1 ABK70991.1 pgsA pgsA ABK75687.1 ABK75687.1 ABK73188.1 ABK73188.1 ABK73453.1 ABK73453.1 ABK71746.1 ABK71746.1 ABK72640.1 ABK72640.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ABK73264.1Membrane associated protein; Identified by match to protein family HMM PF05949. (307 aa)    
Predicted Functional Partners:
ABK74790.1
Integral membrane protein; Identified by match to protein family HMM PF06947.
 
  
 0.986
ABK72025.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05949.
 
  
 0.957
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
    0.801
ABK70991.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02577.
  
  
 0.651
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.610
ABK75687.1
RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849.
  
    0.608
ABK73188.1
Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376.
  
    0.604
ABK73453.1
Conserved hypothetical protein.
   
  
 0.593
ABK71746.1
CDP-diacylglycerol-glycerol-3-phosphate; Identified by match to protein family HMM PF01066.
  
  
 0.584
ABK72640.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.575
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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