Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69551.1 | ABK70275.1 | MSMEG_3656 | MSMEG_3155 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | Band 7 protein; Identified by match to protein family HMM PF01145. | 0.580 |
| ABK69551.1 | ABK71537.1 | MSMEG_3656 | MSMEG_1854 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | Valosin containing protein-1; Identified by match to protein family HMM PF00004; Belongs to the AAA ATPase family. | 0.584 |
| ABK69551.1 | ABK71890.1 | MSMEG_3656 | MSMEG_3655 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | 0.974 |
| ABK69551.1 | ABK72764.1 | MSMEG_3656 | MSMEG_1517 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | 0.599 |
| ABK69551.1 | ABK73210.1 | MSMEG_3656 | MSMEG_0858 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | Cell division control protein Cdc48; Identified by match to protein family HMM PF00004; match to protein family HMM PF02359; Belongs to the AAA ATPase family. | 0.685 |
| ABK69551.1 | ABK73572.1 | MSMEG_3656 | MSMEG_4380 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | 0.905 |
| ABK69551.1 | alc | MSMEG_3656 | MSMEG_5727 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | Allantoicase; Identified by match to protein family HMM PF03561; match to protein family HMM TIGR02961; Belongs to the allantoicase family. | 0.678 |
| ABK69551.1 | eccA1 | MSMEG_3656 | MSMEG_0059 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | ATPase, AAA family protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in both donor and recipient strains. EccA1 exhibits ATPase activity and may provide energy for the export of ESX-1 substrates (By similarity). | 0.584 |
| ABK69551.1 | eccA3 | MSMEG_3656 | MSMEG_0615 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | ATPase, AAA family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. EccA3 exhibits ATPase activity and may provide energy for the export of ESX-3 substrates (By similarity). | 0.581 |
| ABK69551.1 | saeC | MSMEG_3656 | MSMEG_0046 | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.669 |
| ABK70275.1 | ABK69551.1 | MSMEG_3155 | MSMEG_3656 | Band 7 protein; Identified by match to protein family HMM PF01145. | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | 0.580 |
| ABK70275.1 | ABK71537.1 | MSMEG_3155 | MSMEG_1854 | Band 7 protein; Identified by match to protein family HMM PF01145. | Valosin containing protein-1; Identified by match to protein family HMM PF00004; Belongs to the AAA ATPase family. | 0.596 |
| ABK70275.1 | ABK71890.1 | MSMEG_3155 | MSMEG_3655 | Band 7 protein; Identified by match to protein family HMM PF01145. | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | 0.580 |
| ABK70275.1 | ABK72764.1 | MSMEG_3155 | MSMEG_1517 | Band 7 protein; Identified by match to protein family HMM PF01145. | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | 0.756 |
| ABK70275.1 | ABK73210.1 | MSMEG_3155 | MSMEG_0858 | Band 7 protein; Identified by match to protein family HMM PF01145. | Cell division control protein Cdc48; Identified by match to protein family HMM PF00004; match to protein family HMM PF02359; Belongs to the AAA ATPase family. | 0.627 |
| ABK70275.1 | ABK73572.1 | MSMEG_3155 | MSMEG_4380 | Band 7 protein; Identified by match to protein family HMM PF01145. | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | 0.580 |
| ABK70275.1 | eccA1 | MSMEG_3155 | MSMEG_0059 | Band 7 protein; Identified by match to protein family HMM PF01145. | ATPase, AAA family protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in both donor and recipient strains. EccA1 exhibits ATPase activity and may provide energy for the export of ESX-1 substrates (By similarity). | 0.593 |
| ABK70275.1 | eccA3 | MSMEG_3155 | MSMEG_0615 | Band 7 protein; Identified by match to protein family HMM PF01145. | ATPase, AAA family protein; Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG. EccA3 exhibits ATPase activity and may provide energy for the export of ESX-3 substrates (By similarity). | 0.601 |
| ABK70275.1 | saeC | MSMEG_3155 | MSMEG_0046 | Band 7 protein; Identified by match to protein family HMM PF01145. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.746 |
| ABK71537.1 | ABK69551.1 | MSMEG_1854 | MSMEG_3656 | Valosin containing protein-1; Identified by match to protein family HMM PF00004; Belongs to the AAA ATPase family. | ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF06472. | 0.584 |
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