STRINGSTRING
ABK70247.1 ABK70247.1 ABK74503.1 ABK74503.1 ABK69584.1 ABK69584.1 ABK71830.1 ABK71830.1 ABK72870.1 ABK72870.1 pcaC-4 pcaC-4 ABK71184.1 ABK71184.1 ABK74255.1 ABK74255.1 ABK73318.1 ABK73318.1 ABK71204.1 ABK71204.1 ABK75115.1 ABK75115.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70247.1Conserved hypothetical protein. (164 aa)    
Predicted Functional Partners:
ABK74503.1
Succinate dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
       0.823
ABK69584.1
Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107.
   
  
 0.821
ABK71830.1
2-keto-4-pentenoate hydratase; Identified by match to protein family HMM PF01689.
   
  
 0.821
ABK72870.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.814
pcaC-4
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
  
    0.722
ABK71184.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.666
ABK74255.1
Immunogenic protein MPT63.
  
    0.666
ABK73318.1
Conserved hypothetical protein.
  
    0.658
ABK71204.1
Rmt3 protein.
  
     0.614
ABK75115.1
Mce related protein; Identified by match to protein family HMM PF02470.
  
     0.614
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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