Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69592.1 | ABK71885.1 | MSMEG_1384 | MSMEG_3663 | Conserved hypothetical protein; Identified by match to protein family HMM PF05899. | Oxidoreductase; Identified by match to protein family HMM PF01266. | 0.700 |
ABK69668.1 | ABK71055.1 | MSMEG_3667 | MSMEG_3665 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | TrkA domain protein; Identified by match to protein family HMM PF02080. | 0.707 |
ABK69668.1 | ABK71885.1 | MSMEG_3667 | MSMEG_3663 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | Oxidoreductase; Identified by match to protein family HMM PF01266. | 0.569 |
ABK69668.1 | ABK72784.1 | MSMEG_3667 | MSMEG_3666 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | C-5 sterol desaturase. | 0.761 |
ABK69668.1 | ABK74675.1 | MSMEG_3667 | MSMEG_3664 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | 0.651 |
ABK70698.1 | ABK71885.1 | MSMEG_3279 | MSMEG_3663 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Oxidoreductase; Identified by match to protein family HMM PF01266. | 0.632 |
ABK70698.1 | ABK73031.1 | MSMEG_3279 | MSMEG_3280 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Polyamine-binding lipoprotein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.992 |
ABK71055.1 | ABK69668.1 | MSMEG_3665 | MSMEG_3667 | TrkA domain protein; Identified by match to protein family HMM PF02080. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.707 |
ABK71055.1 | ABK71885.1 | MSMEG_3665 | MSMEG_3663 | TrkA domain protein; Identified by match to protein family HMM PF02080. | Oxidoreductase; Identified by match to protein family HMM PF01266. | 0.634 |
ABK71055.1 | ABK72784.1 | MSMEG_3665 | MSMEG_3666 | TrkA domain protein; Identified by match to protein family HMM PF02080. | C-5 sterol desaturase. | 0.701 |
ABK71055.1 | ABK74675.1 | MSMEG_3665 | MSMEG_3664 | TrkA domain protein; Identified by match to protein family HMM PF02080. | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | 0.984 |
ABK71885.1 | ABK69592.1 | MSMEG_3663 | MSMEG_1384 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Conserved hypothetical protein; Identified by match to protein family HMM PF05899. | 0.700 |
ABK71885.1 | ABK69668.1 | MSMEG_3663 | MSMEG_3667 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.569 |
ABK71885.1 | ABK70698.1 | MSMEG_3663 | MSMEG_3279 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.632 |
ABK71885.1 | ABK71055.1 | MSMEG_3663 | MSMEG_3665 | Oxidoreductase; Identified by match to protein family HMM PF01266. | TrkA domain protein; Identified by match to protein family HMM PF02080. | 0.634 |
ABK71885.1 | ABK72784.1 | MSMEG_3663 | MSMEG_3666 | Oxidoreductase; Identified by match to protein family HMM PF01266. | C-5 sterol desaturase. | 0.619 |
ABK71885.1 | ABK72995.1 | MSMEG_3663 | MSMEG_1663 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037. | 0.729 |
ABK71885.1 | ABK73031.1 | MSMEG_3663 | MSMEG_3280 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Polyamine-binding lipoprotein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.700 |
ABK71885.1 | ABK74253.1 | MSMEG_3663 | MSMEG_1662 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Taurine-pyruvate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.812 |
ABK71885.1 | ABK74675.1 | MSMEG_3663 | MSMEG_3664 | Oxidoreductase; Identified by match to protein family HMM PF01266. | Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999. | 0.657 |
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