Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70806.1 | ABK72976.1 | MSMEG_3676 | MSMEG_3675 | Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Metal-dependent hydrolase. | 0.874 |
ABK70806.1 | ABK75035.1 | MSMEG_3676 | MSMEG_3674 | Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Hypothetical protein; Identified by Glimmer2; putative. | 0.486 |
ABK70806.1 | ABK75725.1 | MSMEG_3676 | MSMEG_3677 | Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | 0.701 |
ABK72976.1 | ABK70806.1 | MSMEG_3675 | MSMEG_3676 | Metal-dependent hydrolase. | Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.874 |
ABK72976.1 | ABK75035.1 | MSMEG_3675 | MSMEG_3674 | Metal-dependent hydrolase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.491 |
ABK72976.1 | ABK75725.1 | MSMEG_3675 | MSMEG_3677 | Metal-dependent hydrolase. | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | 0.701 |
ABK75035.1 | ABK70806.1 | MSMEG_3674 | MSMEG_3676 | Hypothetical protein; Identified by Glimmer2; putative. | Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.486 |
ABK75035.1 | ABK72976.1 | MSMEG_3674 | MSMEG_3675 | Hypothetical protein; Identified by Glimmer2; putative. | Metal-dependent hydrolase. | 0.491 |
ABK75035.1 | ABK75725.1 | MSMEG_3674 | MSMEG_3677 | Hypothetical protein; Identified by Glimmer2; putative. | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | 0.425 |
ABK75035.1 | malQ | MSMEG_3674 | MSMEG_3673 | Hypothetical protein; Identified by Glimmer2; putative. | 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217. | 0.605 |
ABK75725.1 | ABK70806.1 | MSMEG_3677 | MSMEG_3676 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | Phenoxybenzoate dioxygenase beta subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.701 |
ABK75725.1 | ABK72976.1 | MSMEG_3677 | MSMEG_3675 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | Metal-dependent hydrolase. | 0.701 |
ABK75725.1 | ABK75035.1 | MSMEG_3677 | MSMEG_3674 | Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. | Hypothetical protein; Identified by Glimmer2; putative. | 0.425 |
malQ | ABK75035.1 | MSMEG_3673 | MSMEG_3674 | 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217. | Hypothetical protein; Identified by Glimmer2; putative. | 0.605 |