Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70481.1 | ABK71266.1 | MSMEG_3684 | MSMEG_3685 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.591 |
ABK70481.1 | ABK73968.1 | MSMEG_3684 | MSMEG_3681 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein; Identified by match to protein family HMM PF05305. | 0.457 |
ABK70481.1 | ABK74279.1 | MSMEG_3684 | MSMEG_3686 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.419 |
ABK70481.1 | ABK74359.1 | MSMEG_3684 | MSMEG_2341 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.628 |
ABK70481.1 | ABK74674.1 | MSMEG_3684 | MSMEG_3255 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681. | 0.562 |
ABK70481.1 | ABK74758.1 | MSMEG_3684 | MSMEG_3683 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.630 |
ABK70481.1 | ABK75676.1 | MSMEG_3684 | MSMEG_1604 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | FAD dependent oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01266. | 0.506 |
ABK70481.1 | ABK76102.1 | MSMEG_3684 | MSMEG_6506 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Nicotinamidase/pyrazinamidase; Identified by match to protein family HMM PF00857. | 0.613 |
ABK71266.1 | ABK70481.1 | MSMEG_3685 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.591 |
ABK71266.1 | ABK74279.1 | MSMEG_3685 | MSMEG_3686 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.558 |
ABK71266.1 | ABK74758.1 | MSMEG_3685 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
ABK73968.1 | ABK70481.1 | MSMEG_3681 | MSMEG_3684 | Conserved hypothetical protein; Identified by match to protein family HMM PF05305. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.457 |
ABK73968.1 | ABK74758.1 | MSMEG_3681 | MSMEG_3683 | Conserved hypothetical protein; Identified by match to protein family HMM PF05305. | Conserved hypothetical protein. | 0.580 |
ABK74279.1 | ABK70481.1 | MSMEG_3686 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.419 |
ABK74279.1 | ABK71266.1 | MSMEG_3686 | MSMEG_3685 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.558 |
ABK74359.1 | ABK70481.1 | MSMEG_2341 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.628 |
ABK74674.1 | ABK70481.1 | MSMEG_3255 | MSMEG_3684 | DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.562 |
ABK74674.1 | ABK76102.1 | MSMEG_3255 | MSMEG_6506 | DoxX subfamily protein, putative; Identified by match to protein family HMM PF07681. | Nicotinamidase/pyrazinamidase; Identified by match to protein family HMM PF00857. | 0.581 |
ABK74758.1 | ABK70481.1 | MSMEG_3683 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.630 |
ABK74758.1 | ABK71266.1 | MSMEG_3683 | MSMEG_3685 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
page 1 of 2