Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70481.1 | ABK71266.1 | MSMEG_3684 | MSMEG_3685 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.591 |
ABK70481.1 | ABK74279.1 | MSMEG_3684 | MSMEG_3686 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.419 |
ABK70481.1 | ABK74758.1 | MSMEG_3684 | MSMEG_3683 | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | Conserved hypothetical protein. | 0.630 |
ABK71266.1 | ABK70481.1 | MSMEG_3685 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.591 |
ABK71266.1 | ABK74279.1 | MSMEG_3685 | MSMEG_3686 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.558 |
ABK71266.1 | ABK74758.1 | MSMEG_3685 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
ABK71266.1 | ABK75029.1 | MSMEG_3685 | MSMEG_3687 | Conserved hypothetical protein. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.408 |
ABK74279.1 | ABK70481.1 | MSMEG_3686 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.419 |
ABK74279.1 | ABK71266.1 | MSMEG_3686 | MSMEG_3685 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.558 |
ABK74279.1 | ABK75029.1 | MSMEG_3686 | MSMEG_3687 | Conserved hypothetical protein. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.582 |
ABK74758.1 | ABK70481.1 | MSMEG_3683 | MSMEG_3684 | Conserved hypothetical protein. | Nuclear transport factor 2 (NTF2) domain family protein; Identified by match to protein family HMM PF02136. | 0.630 |
ABK74758.1 | ABK71266.1 | MSMEG_3683 | MSMEG_3685 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
ABK75029.1 | ABK71266.1 | MSMEG_3687 | MSMEG_3685 | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Conserved hypothetical protein. | 0.408 |
ABK75029.1 | ABK74279.1 | MSMEG_3687 | MSMEG_3686 | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Conserved hypothetical protein. | 0.582 |