Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69777.1 | ABK70260.1 | MSMEG_1543 | MSMEG_4952 | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.704 |
ABK69777.1 | ABK71396.1 | MSMEG_1543 | MSMEG_5908 | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.716 |
ABK69777.1 | ABK75029.1 | MSMEG_1543 | MSMEG_3687 | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.705 |
ABK69790.1 | ABK70260.1 | MSMEG_5922 | MSMEG_4952 | Lipid-transfer protein. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.654 |
ABK69790.1 | ABK71396.1 | MSMEG_5922 | MSMEG_5908 | Lipid-transfer protein. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.743 |
ABK69790.1 | ABK75029.1 | MSMEG_5922 | MSMEG_3687 | Lipid-transfer protein. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.760 |
ABK69790.1 | ABK75469.1 | MSMEG_5922 | MSMEG_5923 | Lipid-transfer protein. | acetyl-CoA acetyltransferase. | 0.961 |
ABK70007.1 | ABK70260.1 | MSMEG_2597 | MSMEG_4952 | Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.703 |
ABK70007.1 | ABK71396.1 | MSMEG_2597 | MSMEG_5908 | Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.703 |
ABK70007.1 | ABK75029.1 | MSMEG_2597 | MSMEG_3687 | Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.704 |
ABK70260.1 | ABK69777.1 | MSMEG_4952 | MSMEG_1543 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.704 |
ABK70260.1 | ABK69790.1 | MSMEG_4952 | MSMEG_5922 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Lipid-transfer protein. | 0.654 |
ABK70260.1 | ABK70007.1 | MSMEG_4952 | MSMEG_2597 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.703 |
ABK70260.1 | ABK71774.1 | MSMEG_4952 | MSMEG_6392 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.784 |
ABK70260.1 | ABK75029.1 | MSMEG_4952 | MSMEG_3687 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.833 |
ABK70260.1 | ABK75469.1 | MSMEG_4952 | MSMEG_5923 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | acetyl-CoA acetyltransferase. | 0.634 |
ABK70260.1 | ABK75633.1 | MSMEG_4952 | MSMEG_4301 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.720 |
ABK70260.1 | pks | MSMEG_4952 | MSMEG_0408 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.703 |
ABK71396.1 | ABK69777.1 | MSMEG_5908 | MSMEG_1543 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Eptc-inducible aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.716 |
ABK71396.1 | ABK69790.1 | MSMEG_5908 | MSMEG_5922 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Lipid-transfer protein. | 0.743 |
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