STRINGSTRING
ABK75209.1 ABK75209.1 ABK74460.1 ABK74460.1 ABK75063.1 ABK75063.1 ABK71271.1 ABK71271.1 ABK75798.1 ABK75798.1 ABK72387.1 ABK72387.1 ABK73574.1 ABK73574.1 tatA tatA tatB tatB ABK69834.1 ABK69834.1 ABK73904.1 ABK73904.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75209.1Peroxidase; Identified by match to protein family HMM TIGR01413. (443 aa)    
Predicted Functional Partners:
ABK74460.1
Conserved hypothetical protein.
 
    0.953
ABK75063.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04314.
  
  
 0.714
ABK71271.1
Copper resistance protein CopC; Identified by match to protein family HMM PF04234.
  
  
 0.674
ABK75798.1
Iron permease FTR1; Identified by match to protein family HMM PF03239.
  
  
 0.591
ABK72387.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.569
ABK73574.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05368.
 
     0.459
tatA
Twin arginine-targeting protein translocase, TatA/E family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.434
tatB
Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
  
  
 0.431
ABK69834.1
IS1096, tnpA protein; Identified by similarity to GP:150005; match to protein family HMM PF01610.
       0.429
ABK73904.1
4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
  
     0.423
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.