Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69546.1 | ABK71109.1 | MSMEG_3720 | MSMEG_3719 | Recombination activating protein 1. | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | 0.768 |
| ABK69546.1 | ABK71268.1 | MSMEG_3720 | MSMEG_3727 | Recombination activating protein 1. | Hypothetical protein; Identified by Glimmer2; putative. | 0.477 |
| ABK69546.1 | ABK72273.1 | MSMEG_3720 | MSMEG_3726 | Recombination activating protein 1. | Alcohol dehydrogenase; Identified by match to protein family HMM PF01011; match to protein family HMM TIGR03075. | 0.489 |
| ABK69546.1 | ABK74139.1 | MSMEG_3720 | MSMEG_3722 | Recombination activating protein 1. | Bifunctional coenzyme PQQ synthesis protein C/D; Identified by match to protein family HMM PF05402. | 0.777 |
| ABK69546.1 | pqqB | MSMEG_3720 | MSMEG_3724 | Recombination activating protein 1. | Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.777 |
| ABK69546.1 | pqqC | MSMEG_3720 | MSMEG_3723 | Recombination activating protein 1. | Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.777 |
| ABK69546.1 | pqqE | MSMEG_3720 | MSMEG_3721 | Recombination activating protein 1. | Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.777 |
| ABK71109.1 | ABK69546.1 | MSMEG_3719 | MSMEG_3720 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Recombination activating protein 1. | 0.768 |
| ABK71109.1 | ABK71268.1 | MSMEG_3719 | MSMEG_3727 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Hypothetical protein; Identified by Glimmer2; putative. | 0.495 |
| ABK71109.1 | ABK72099.1 | MSMEG_3719 | MSMEG_1426 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Probable membrane sugar transferase; Identified by match to protein family HMM PF00535. | 0.415 |
| ABK71109.1 | ABK72273.1 | MSMEG_3719 | MSMEG_3726 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Alcohol dehydrogenase; Identified by match to protein family HMM PF01011; match to protein family HMM TIGR03075. | 0.789 |
| ABK71109.1 | ABK74139.1 | MSMEG_3719 | MSMEG_3722 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Bifunctional coenzyme PQQ synthesis protein C/D; Identified by match to protein family HMM PF05402. | 0.898 |
| ABK71109.1 | pqqB | MSMEG_3719 | MSMEG_3724 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.863 |
| ABK71109.1 | pqqC | MSMEG_3719 | MSMEG_3723 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Coenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.851 |
| ABK71109.1 | pqqE | MSMEG_3719 | MSMEG_3721 | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.860 |
| ABK71268.1 | ABK69546.1 | MSMEG_3727 | MSMEG_3720 | Hypothetical protein; Identified by Glimmer2; putative. | Recombination activating protein 1. | 0.477 |
| ABK71268.1 | ABK71109.1 | MSMEG_3727 | MSMEG_3719 | Hypothetical protein; Identified by Glimmer2; putative. | Sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699. | 0.495 |
| ABK71268.1 | ABK72273.1 | MSMEG_3727 | MSMEG_3726 | Hypothetical protein; Identified by Glimmer2; putative. | Alcohol dehydrogenase; Identified by match to protein family HMM PF01011; match to protein family HMM TIGR03075. | 0.800 |
| ABK71268.1 | ABK74139.1 | MSMEG_3727 | MSMEG_3722 | Hypothetical protein; Identified by Glimmer2; putative. | Bifunctional coenzyme PQQ synthesis protein C/D; Identified by match to protein family HMM PF05402. | 0.507 |
| ABK71268.1 | pqqB | MSMEG_3727 | MSMEG_3724 | Hypothetical protein; Identified by Glimmer2; putative. | Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.516 |
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