Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71018.1 | ABK71205.1 | MSMEG_1246 | MSMEG_3751 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 0.820 |
| ABK71018.1 | ABK74298.1 | MSMEG_1246 | MSMEG_3754 | Conserved hypothetical protein. | TPR-repeat-containing protein. | 0.430 |
| ABK71018.1 | nadK | MSMEG_1246 | MSMEG_3750 | Conserved hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NADkinase); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.673 |
| ABK71205.1 | ABK71018.1 | MSMEG_3751 | MSMEG_1246 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | Conserved hypothetical protein. | 0.820 |
| ABK71205.1 | ABK71293.1 | MSMEG_3751 | MSMEG_5687 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 23s ribosomal RNA methyltransferase; Identified by match to protein family HMM PF00588. | 0.792 |
| ABK71205.1 | ABK71513.1 | MSMEG_3751 | MSMEG_3752 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | Conserved hypothetical protein. | 0.913 |
| ABK71205.1 | ABK71721.1 | MSMEG_3751 | MSMEG_3753 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | 0.904 |
| ABK71205.1 | ABK74298.1 | MSMEG_3751 | MSMEG_3754 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | TPR-repeat-containing protein. | 0.908 |
| ABK71205.1 | ABK76102.1 | MSMEG_3751 | MSMEG_6506 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | Nicotinamidase/pyrazinamidase; Identified by match to protein family HMM PF00857. | 0.789 |
| ABK71205.1 | gidB | MSMEG_3751 | MSMEG_6940 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 518 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.822 |
| ABK71205.1 | gyrA | MSMEG_3751 | MSMEG_0006 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.799 |
| ABK71205.1 | nadK | MSMEG_3751 | MSMEG_3750 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | Inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NADkinase); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.996 |
| ABK71205.1 | rpoB | MSMEG_3751 | MSMEG_1367 | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. This subunit often mutates to generate rifampicin (Rif) resistance. Interaction with RbpA partially restores Rif-inhibited transcription; once the subunit is Rif-resistant however RbpA no longer stimulates transcription. | 0.791 |
| ABK71293.1 | ABK71205.1 | MSMEG_5687 | MSMEG_3751 | 23s ribosomal RNA methyltransferase; Identified by match to protein family HMM PF00588. | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 0.792 |
| ABK71513.1 | ABK71205.1 | MSMEG_3752 | MSMEG_3751 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 0.913 |
| ABK71513.1 | ABK71721.1 | MSMEG_3752 | MSMEG_3753 | Conserved hypothetical protein. | Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | 0.951 |
| ABK71513.1 | ABK74298.1 | MSMEG_3752 | MSMEG_3754 | Conserved hypothetical protein. | TPR-repeat-containing protein. | 0.951 |
| ABK71513.1 | nadK | MSMEG_3752 | MSMEG_3750 | Conserved hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NADkinase); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.955 |
| ABK71721.1 | ABK71205.1 | MSMEG_3753 | MSMEG_3751 | Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 0.904 |
| ABK71721.1 | ABK71513.1 | MSMEG_3753 | MSMEG_3752 | Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Conserved hypothetical protein. | 0.951 |
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