STRINGSTRING
ABK75788.1 ABK75788.1 ABK71206.1 ABK71206.1 ABK73796.1 ABK73796.1 ABK74145.1 ABK74145.1 ABK71780.1 ABK71780.1 ABK70413.1 ABK70413.1 ABK74323.1 ABK74323.1 ABK72637.1 ABK72637.1 ABK70716.1 ABK70716.1 ABK75960.1 ABK75960.1 lprG lprG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75788.1Conserved hypothetical protein. (345 aa)    
Predicted Functional Partners:
ABK71206.1
Transcriptional regulator, Crp/Fnr family protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.
      
 0.819
ABK73796.1
Transcriptional regulator, Crp/Fnr family protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.
      
 0.814
ABK74145.1
Conserved hypothetical protein.
 
    0.744
ABK71780.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
    0.684
ABK70413.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.670
ABK74323.1
Conserved hypothetical protein.
  
     0.600
ABK72637.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
    0.598
ABK70716.1
Identified by match to protein family HMM PF01476.
  
    0.589
ABK75960.1
Conserved hypothetical protein.
  
    0.534
lprG
LprG protein; Probably helps membrane protein MSMEG_3069/MSMEI_2992 (P55) transport triacylglycerides (TAG) across the inner cell membrane into the periplasm and probably ultimately to the outer membrane (By similarity). Required for MSMEG_3069/MSMEI_2992 export activity. Export of ethidium bromide by MSMEG_3069/MSMEI_2992 can be complemented by the equivalent operon from M.tuberculosis (lprG-Rv1410c). Belongs to the LppX/LprAFG lipoprotein family.
  
     0.516
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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