STRINGSTRING
ABK76135.1 ABK76135.1 eda-2 eda-2 eda eda ABK74739.1 ABK74739.1 edd edd ABK70924.1 ABK70924.1 rpe rpe ABK69998.1 ABK69998.1 ABK69840.1 ABK69840.1 ABK73303.1 ABK73303.1 ABK71126.1 ABK71126.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76135.1PfkB-family protein carbohydrate kinase; Identified by match to protein family HMM PF00294. (331 aa)    
Predicted Functional Partners:
eda-2
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182.
 
 
 0.990
eda
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by similarity to SP:P10177; match to protein family HMM PF01081; match to protein family HMM TIGR01182.
 
 
 0.966
ABK74739.1
2-Keto-3-deoxy-gluconate kinase; Identified by match to protein family HMM PF00294.
  
 
 
0.929
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.913
ABK70924.1
Transcriptional regulator, IclR family protein; Identified by match to protein family HMM PF01614.
 
  
 0.888
rpe
Ribulose-phosphate 3-epimerase; Identified by similarity to SP:P46969; match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.874
ABK69998.1
Starvation-sensing protein RspA; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.
 
 
 0.863
ABK69840.1
2-deoxy-D-gluconate 3-dehydrogenase; Identified by match to protein family HMM PF00106.
 
 0.845
ABK73303.1
2-deoxy-D-gluconate 3-dehydrogenase; Identified by match to protein family HMM PF00106.
  
 0.844
ABK71126.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
 
 0.842
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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