Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69531.1 | ABK75235.1 | MSMEG_3806 | MSMEG_3804 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.888 |
ABK69890.1 | ABK69997.1 | MSMEG_4628 | MSMEG_3142 | Conserved hypothetical protein. | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | 0.742 |
ABK69890.1 | ABK70495.1 | MSMEG_4628 | MSMEG_2753 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.693 |
ABK69890.1 | ABK71866.1 | MSMEG_4628 | MSMEG_5536 | Conserved hypothetical protein. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.757 |
ABK69890.1 | ABK72397.1 | MSMEG_4628 | MSMEG_4898 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.769 |
ABK69890.1 | ABK72696.1 | MSMEG_4628 | MSMEG_1684 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
ABK69890.1 | ABK73349.1 | MSMEG_4628 | MSMEG_4692 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.760 |
ABK69890.1 | ABK74248.1 | MSMEG_4628 | MSMEG_4245 | Conserved hypothetical protein. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.771 |
ABK69890.1 | ABK75235.1 | MSMEG_4628 | MSMEG_3804 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.770 |
ABK69890.1 | ABK75441.1 | MSMEG_4628 | MSMEG_6100 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.716 |
ABK69997.1 | ABK69890.1 | MSMEG_3142 | MSMEG_4628 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.742 |
ABK69997.1 | ABK70495.1 | MSMEG_3142 | MSMEG_2753 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.413 |
ABK69997.1 | ABK71866.1 | MSMEG_3142 | MSMEG_5536 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.715 |
ABK69997.1 | ABK72397.1 | MSMEG_3142 | MSMEG_4898 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.710 |
ABK69997.1 | ABK72696.1 | MSMEG_3142 | MSMEG_1684 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.581 |
ABK69997.1 | ABK73349.1 | MSMEG_3142 | MSMEG_4692 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.609 |
ABK69997.1 | ABK74248.1 | MSMEG_3142 | MSMEG_4245 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.740 |
ABK69997.1 | ABK75235.1 | MSMEG_3142 | MSMEG_3804 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.758 |
ABK69997.1 | ABK75441.1 | MSMEG_3142 | MSMEG_6100 | HTH-type transcriptional repressor AcnR; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.594 |
ABK70495.1 | ABK69890.1 | MSMEG_2753 | MSMEG_4628 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.693 |
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