Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69592.1 | ABK72347.1 | MSMEG_1384 | MSMEG_3821 | Conserved hypothetical protein; Identified by match to protein family HMM PF05899. | Amino acid permease; Identified by match to protein family HMM PF00324. | 0.534 |
| ABK69592.1 | ABK75021.1 | MSMEG_1384 | MSMEG_6688 | Conserved hypothetical protein; Identified by match to protein family HMM PF05899. | Identified by match to protein family HMM PF07905. | 0.423 |
| ABK70374.1 | ABK72347.1 | MSMEG_6701 | MSMEG_3821 | Amino acid permease; Identified by match to protein family HMM PF00324. | Amino acid permease; Identified by match to protein family HMM PF00324. | 0.565 |
| ABK70374.1 | ABK74343.1 | MSMEG_6701 | MSMEG_3576 | Amino acid permease; Identified by match to protein family HMM PF00324. | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | 0.659 |
| ABK70374.1 | ABK74424.1 | MSMEG_6701 | MSMEG_4696 | Amino acid permease; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00128. | 0.659 |
| ABK70374.1 | glgE | MSMEG_6701 | MSMEG_4916 | Amino acid permease; Identified by match to protein family HMM PF00324. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.660 |
| ABK70374.1 | treS | MSMEG_6701 | MSMEG_6515 | Amino acid permease; Identified by match to protein family HMM PF00324. | Trehalose synthase; Catalyzes the reversible interconversion of maltose and trehalose by transglucosylation. Maltose is the preferred substrate. To a lesser extent, also displays amylase activity, catalyzing the endohydrolysis of (1->4)-alpha-D- glucosidic linkages in glycogen and maltooligosaccharides such as maltoheptaose, to produce maltose which then can be converted to trehalose. TreS plays a key role in the utilization of trehalose for the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Might also functio [...] | 0.661 |
| ABK72347.1 | ABK69592.1 | MSMEG_3821 | MSMEG_1384 | Amino acid permease; Identified by match to protein family HMM PF00324. | Conserved hypothetical protein; Identified by match to protein family HMM PF05899. | 0.534 |
| ABK72347.1 | ABK70374.1 | MSMEG_3821 | MSMEG_6701 | Amino acid permease; Identified by match to protein family HMM PF00324. | Amino acid permease; Identified by match to protein family HMM PF00324. | 0.565 |
| ABK72347.1 | ABK74199.1 | MSMEG_3821 | MSMEG_0442 | Amino acid permease; Identified by match to protein family HMM PF00324. | Tetracyclin repressor, C- all-alpha domain protein; Identified by match to protein family HMM PF02909. | 0.533 |
| ABK72347.1 | ABK74343.1 | MSMEG_3821 | MSMEG_3576 | Amino acid permease; Identified by match to protein family HMM PF00324. | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | 0.659 |
| ABK72347.1 | ABK74424.1 | MSMEG_3821 | MSMEG_4696 | Amino acid permease; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00128. | 0.660 |
| ABK72347.1 | ABK75021.1 | MSMEG_3821 | MSMEG_6688 | Amino acid permease; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF07905. | 0.458 |
| ABK72347.1 | ABK75385.1 | MSMEG_3821 | MSMEG_3820 | Amino acid permease; Identified by match to protein family HMM PF00324. | Hypothetical protein; Identified by Glimmer2; putative. | 0.778 |
| ABK72347.1 | glgE | MSMEG_3821 | MSMEG_4916 | Amino acid permease; Identified by match to protein family HMM PF00324. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.660 |
| ABK72347.1 | glsA | MSMEG_3821 | MSMEG_3818 | Amino acid permease; Identified by match to protein family HMM PF00324. | Thermolabile glutaminase; Identified by match to protein family HMM PF04960; Belongs to the glutaminase family. | 0.642 |
| ABK72347.1 | treS | MSMEG_3821 | MSMEG_6515 | Amino acid permease; Identified by match to protein family HMM PF00324. | Trehalose synthase; Catalyzes the reversible interconversion of maltose and trehalose by transglucosylation. Maltose is the preferred substrate. To a lesser extent, also displays amylase activity, catalyzing the endohydrolysis of (1->4)-alpha-D- glucosidic linkages in glycogen and maltooligosaccharides such as maltoheptaose, to produce maltose which then can be converted to trehalose. TreS plays a key role in the utilization of trehalose for the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Might also functio [...] | 0.660 |
| ABK74199.1 | ABK72347.1 | MSMEG_0442 | MSMEG_3821 | Tetracyclin repressor, C- all-alpha domain protein; Identified by match to protein family HMM PF02909. | Amino acid permease; Identified by match to protein family HMM PF00324. | 0.533 |
| ABK74199.1 | ABK75021.1 | MSMEG_0442 | MSMEG_6688 | Tetracyclin repressor, C- all-alpha domain protein; Identified by match to protein family HMM PF02909. | Identified by match to protein family HMM PF07905. | 0.592 |
| ABK74343.1 | ABK70374.1 | MSMEG_3576 | MSMEG_6701 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Amino acid permease; Identified by match to protein family HMM PF00324. | 0.659 |
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