Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70103.1 | ABK70201.1 | MSMEG_4757 | MSMEG_3823 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.972 |
| ABK70103.1 | ABK70443.1 | MSMEG_4757 | MSMEG_4055 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | 0.973 |
| ABK70103.1 | ABK73243.1 | MSMEG_4757 | MSMEG_3824 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Conserved hypothetical protein; Identified by match to protein family HMM PF06545. | 0.538 |
| ABK70103.1 | ABK73396.1 | MSMEG_4757 | MSMEG_4074 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Peroxisomal trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00106. | 0.738 |
| ABK70103.1 | ABK74871.1 | MSMEG_4757 | MSMEG_3825 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106. | 0.740 |
| ABK70201.1 | ABK70103.1 | MSMEG_3823 | MSMEG_4757 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.972 |
| ABK70201.1 | ABK70330.1 | MSMEG_3823 | MSMEG_3828 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.805 |
| ABK70201.1 | ABK70443.1 | MSMEG_3823 | MSMEG_4055 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106. | 0.774 |
| ABK70201.1 | ABK71105.1 | MSMEG_3823 | MSMEG_3826 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Hypothetical protein; Identified by Glimmer2; putative. | 0.779 |
| ABK70201.1 | ABK72846.1 | MSMEG_3823 | MSMEG_2013 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.783 |
| ABK70201.1 | ABK73243.1 | MSMEG_3823 | MSMEG_3824 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Conserved hypothetical protein; Identified by match to protein family HMM PF06545. | 0.822 |
| ABK70201.1 | ABK73396.1 | MSMEG_3823 | MSMEG_4074 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Peroxisomal trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00106. | 0.769 |
| ABK70201.1 | ABK74871.1 | MSMEG_3823 | MSMEG_3825 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106. | 0.835 |
| ABK70201.1 | ABK75298.1 | MSMEG_3823 | MSMEG_5966 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.784 |
| ABK70201.1 | ABK75823.1 | MSMEG_3823 | MSMEG_3827 | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.805 |
| ABK70330.1 | ABK70201.1 | MSMEG_3828 | MSMEG_3823 | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.805 |
| ABK70330.1 | ABK71105.1 | MSMEG_3828 | MSMEG_3826 | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.789 |
| ABK70330.1 | ABK73243.1 | MSMEG_3828 | MSMEG_3824 | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF06545. | 0.798 |
| ABK70330.1 | ABK74871.1 | MSMEG_3828 | MSMEG_3825 | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106. | 0.813 |
| ABK70330.1 | ABK75823.1 | MSMEG_3828 | MSMEG_3827 | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | Glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family. | 0.845 |
page 1 of 3