Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71482.1 | ABK71695.1 | MSMEG_5969 | MSMEG_3834 | Conserved hypothetical protein. | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.436 |
| ABK71695.1 | ABK71482.1 | MSMEG_3834 | MSMEG_5969 | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.436 |
| ABK71695.1 | ABK71752.1 | MSMEG_3834 | MSMEG_3835 | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | YesF protein. | 0.776 |
| ABK71695.1 | ABK72793.1 | MSMEG_3834 | MSMEG_3836 | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.834 |
| ABK71695.1 | ABK73527.1 | MSMEG_3834 | MSMEG_3838 | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Integral membrane protein. | 0.540 |
| ABK71695.1 | ABK75087.1 | MSMEG_3834 | MSMEG_6564 | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.768 |
| ABK71695.1 | rpsA | MSMEG_3834 | MSMEG_3833 | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | 0.457 |
| ABK71752.1 | ABK71695.1 | MSMEG_3835 | MSMEG_3834 | YesF protein. | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.776 |
| ABK71752.1 | ABK72793.1 | MSMEG_3835 | MSMEG_3836 | YesF protein. | Conserved hypothetical protein. | 0.794 |
| ABK71752.1 | ABK73527.1 | MSMEG_3835 | MSMEG_3838 | YesF protein. | Integral membrane protein. | 0.527 |
| ABK71752.1 | rpsA | MSMEG_3835 | MSMEG_3833 | YesF protein. | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | 0.454 |
| ABK72793.1 | ABK71695.1 | MSMEG_3836 | MSMEG_3834 | Conserved hypothetical protein. | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.834 |
| ABK72793.1 | ABK71752.1 | MSMEG_3836 | MSMEG_3835 | Conserved hypothetical protein. | YesF protein. | 0.794 |
| ABK72793.1 | ABK73527.1 | MSMEG_3836 | MSMEG_3838 | Conserved hypothetical protein. | Integral membrane protein. | 0.527 |
| ABK72793.1 | rpsA | MSMEG_3836 | MSMEG_3833 | Conserved hypothetical protein. | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | 0.450 |
| ABK73527.1 | ABK71695.1 | MSMEG_3838 | MSMEG_3834 | Integral membrane protein. | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.540 |
| ABK73527.1 | ABK71752.1 | MSMEG_3838 | MSMEG_3835 | Integral membrane protein. | YesF protein. | 0.527 |
| ABK73527.1 | ABK72793.1 | MSMEG_3838 | MSMEG_3836 | Integral membrane protein. | Conserved hypothetical protein. | 0.527 |
| ABK75087.1 | ABK71695.1 | MSMEG_6564 | MSMEG_3834 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.768 |
| rpsA | ABK71695.1 | MSMEG_3833 | MSMEG_3834 | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | Putative TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.457 |
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