Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69818.1 | ABK70115.1 | MSMEG_3837 | MSMEG_3842 | Conserved hypothetical protein. | Putative esterase. | 0.565 |
ABK69818.1 | ABK71478.1 | MSMEG_3837 | MSMEG_3840 | Conserved hypothetical protein. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.781 |
ABK69818.1 | ABK73987.1 | MSMEG_3837 | MSMEG_3841 | Conserved hypothetical protein. | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.572 |
ABK69818.1 | ABK74235.1 | MSMEG_3837 | MSMEG_3844 | Conserved hypothetical protein. | Lipid-transfer protein. | 0.435 |
ABK69818.1 | polA | MSMEG_3837 | MSMEG_3839 | Conserved hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.792 |
ABK70115.1 | ABK69818.1 | MSMEG_3842 | MSMEG_3837 | Putative esterase. | Conserved hypothetical protein. | 0.565 |
ABK70115.1 | ABK71478.1 | MSMEG_3842 | MSMEG_3840 | Putative esterase. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.600 |
ABK70115.1 | ABK73987.1 | MSMEG_3842 | MSMEG_3841 | Putative esterase. | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.874 |
ABK70115.1 | ABK74235.1 | MSMEG_3842 | MSMEG_3844 | Putative esterase. | Lipid-transfer protein. | 0.649 |
ABK70115.1 | polA | MSMEG_3842 | MSMEG_3839 | Putative esterase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.627 |
ABK71478.1 | ABK69818.1 | MSMEG_3840 | MSMEG_3837 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Conserved hypothetical protein. | 0.781 |
ABK71478.1 | ABK70115.1 | MSMEG_3840 | MSMEG_3842 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Putative esterase. | 0.600 |
ABK71478.1 | ABK72885.1 | MSMEG_3840 | MSMEG_3260 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.619 |
ABK71478.1 | ABK72966.1 | MSMEG_3840 | MSMEG_3972 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.705 |
ABK71478.1 | ABK73987.1 | MSMEG_3840 | MSMEG_3841 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Monooxygenase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.582 |
ABK71478.1 | ABK74022.1 | MSMEG_3840 | MSMEG_6840 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.646 |
ABK71478.1 | ABK74235.1 | MSMEG_3840 | MSMEG_3844 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Lipid-transfer protein. | 0.497 |
ABK71478.1 | ABK75106.1 | MSMEG_3840 | MSMEG_0742 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.466 |
ABK71478.1 | ABK75149.1 | MSMEG_3840 | MSMEG_1985 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.470 |
ABK71478.1 | polA | MSMEG_3840 | MSMEG_3839 | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.813 |
page 1 of 3