Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69524.1 | ABK72262.1 | MSMEG_3851 | MSMEG_3846 | LppI protein. | Identified by match to protein family HMM PF01636. | 0.717 |
ABK69524.1 | ABK75042.1 | MSMEG_3851 | MSMEG_3847 | LppI protein. | Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728. | 0.501 |
ABK69524.1 | ABK75312.1 | MSMEG_3851 | MSMEG_3848 | LppI protein. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.658 |
ABK69524.1 | aroK | MSMEG_3851 | MSMEG_0453 | LppI protein. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.554 |
ABK72262.1 | ABK69524.1 | MSMEG_3846 | MSMEG_3851 | Identified by match to protein family HMM PF01636. | LppI protein. | 0.717 |
ABK72262.1 | ABK75042.1 | MSMEG_3846 | MSMEG_3847 | Identified by match to protein family HMM PF01636. | Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728. | 0.622 |
ABK72262.1 | ABK75312.1 | MSMEG_3846 | MSMEG_3848 | Identified by match to protein family HMM PF01636. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.782 |
ABK72262.1 | aroK | MSMEG_3846 | MSMEG_0453 | Identified by match to protein family HMM PF01636. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.578 |
ABK75042.1 | ABK69524.1 | MSMEG_3847 | MSMEG_3851 | Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728. | LppI protein. | 0.501 |
ABK75042.1 | ABK72262.1 | MSMEG_3847 | MSMEG_3846 | Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728. | Identified by match to protein family HMM PF01636. | 0.622 |
ABK75042.1 | ABK75312.1 | MSMEG_3847 | MSMEG_3848 | Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.745 |
ABK75312.1 | ABK69524.1 | MSMEG_3848 | MSMEG_3851 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | LppI protein. | 0.658 |
ABK75312.1 | ABK72262.1 | MSMEG_3848 | MSMEG_3846 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | Identified by match to protein family HMM PF01636. | 0.782 |
ABK75312.1 | ABK75042.1 | MSMEG_3848 | MSMEG_3847 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | Copper methylamine oxidase; Identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728. | 0.745 |
ABK75312.1 | aroK | MSMEG_3848 | MSMEG_0453 | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | 0.560 |
aroK | ABK69524.1 | MSMEG_0453 | MSMEG_3851 | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | LppI protein. | 0.554 |
aroK | ABK72262.1 | MSMEG_0453 | MSMEG_3846 | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | Identified by match to protein family HMM PF01636. | 0.578 |
aroK | ABK75312.1 | MSMEG_0453 | MSMEG_3848 | Shikimate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313. | Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family. | 0.560 |