Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69573.1 | ABK70061.1 | MSMEG_0550 | MSMEG_6495 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | 0.966 |
| ABK69573.1 | ABK70686.1 | MSMEG_0550 | MSMEG_3850 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | 0.778 |
| ABK69573.1 | ABK71607.1 | MSMEG_0550 | MSMEG_3854 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | 0.974 |
| ABK69573.1 | ABK71685.1 | MSMEG_0550 | MSMEG_0549 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.991 |
| ABK69573.1 | ABK71895.1 | MSMEG_0550 | MSMEG_5530 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | 0.974 |
| ABK69573.1 | ABK72173.1 | MSMEG_0550 | MSMEG_2099 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC transporter, substrate binding protein [nitrate/sulfonate], putative. | 0.929 |
| ABK69573.1 | ABK72349.1 | MSMEG_0550 | MSMEG_4586 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | 0.915 |
| ABK69573.1 | ABK72495.1 | MSMEG_0550 | MSMEG_3852 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.927 |
| ABK69573.1 | ABK74762.1 | MSMEG_0550 | MSMEG_4588 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. | 0.974 |
| ABK69573.1 | ssuB | MSMEG_0550 | MSMEG_3853 | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.930 |
| ABK70061.1 | ABK69573.1 | MSMEG_6495 | MSMEG_0550 | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.966 |
| ABK70061.1 | ABK70686.1 | MSMEG_6495 | MSMEG_3850 | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | 0.715 |
| ABK70061.1 | ABK72173.1 | MSMEG_6495 | MSMEG_2099 | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | ABC transporter, substrate binding protein [nitrate/sulfonate], putative. | 0.969 |
| ABK70061.1 | ABK72349.1 | MSMEG_6495 | MSMEG_4586 | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | 0.924 |
| ABK70061.1 | ABK72495.1 | MSMEG_6495 | MSMEG_3852 | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.960 |
| ABK70061.1 | ssuB | MSMEG_6495 | MSMEG_3853 | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.920 |
| ABK70686.1 | ABK69573.1 | MSMEG_3850 | MSMEG_0550 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | Sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.778 |
| ABK70686.1 | ABK70061.1 | MSMEG_3850 | MSMEG_6495 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative; Identified by match to protein family HMM PF00528. | 0.715 |
| ABK70686.1 | ABK71607.1 | MSMEG_3850 | MSMEG_3854 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | 0.944 |
| ABK70686.1 | ABK71685.1 | MSMEG_3850 | MSMEG_0549 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.808 |
page 1 of 5