Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70051.1 | ABK73064.1 | MSMEG_3863 | MSMEG_3861 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.571 |
| ABK70051.1 | ABK73409.1 | MSMEG_3863 | MSMEG_3862 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | FxsA cytoplasmic membrane protein; Identified by match to protein family HMM PF04186. | 0.631 |
| ABK70051.1 | cobN | MSMEG_3863 | MSMEG_3864 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257. | 0.741 |
| ABK70051.1 | lnt | MSMEG_3863 | MSMEG_3860 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Polyprenol-monophosphomannose synthase Ppm1; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation. Can transfer a number of fatty acids (C16 and C19, palmitic and probably tuberculostearic acids respectively are shown). Enhances the polyprenol monophosphomannose (PPM) synthase activity of Ppm1 (AC A0QZ12) without itself having PPM synthase catalytic activity. | 0.569 |
| ABK70051.1 | ppm1 | MSMEG_3863 | MSMEG_3859 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Glycosyl transferase, group 2 family protein; Transfers mannose from GDP-mannose to lipid acceptors to form polyprenol monophosphomannose (PPM); catalytic activity in vitro is enhanced by Lnt (AC A0QZ13). PMM is an alkai-stable sugar donor which adds mannose-phosphate residues to triacylated-PIM2, eventually leading to generation of the cell wall glycolipid lipoglycan modulins lipoarabinomannan (LAM) and lipomannan (LM) (By similarity). | 0.573 |
| ABK71246.1 | ABK73064.1 | MSMEG_2431 | MSMEG_3861 | Amidohydrolase 3; Identified by match to protein family HMM PF01979. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.623 |
| ABK73064.1 | ABK70051.1 | MSMEG_3861 | MSMEG_3863 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.571 |
| ABK73064.1 | ABK71246.1 | MSMEG_3861 | MSMEG_2431 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Amidohydrolase 3; Identified by match to protein family HMM PF01979. | 0.623 |
| ABK73064.1 | ABK73071.1 | MSMEG_3861 | MSMEG_3045 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Integral membrane protein. | 0.653 |
| ABK73064.1 | ABK73409.1 | MSMEG_3861 | MSMEG_3862 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | FxsA cytoplasmic membrane protein; Identified by match to protein family HMM PF04186. | 0.870 |
| ABK73064.1 | ABK73785.1 | MSMEG_3861 | MSMEG_4200 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Peptidase M20; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. | 0.503 |
| ABK73064.1 | ABK75296.1 | MSMEG_3861 | MSMEG_2665 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Conserved hypothetical protein. | 0.530 |
| ABK73064.1 | ABK75821.1 | MSMEG_3861 | MSMEG_1671 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | 0.492 |
| ABK73064.1 | cobN | MSMEG_3861 | MSMEG_3864 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257. | 0.512 |
| ABK73064.1 | lnt | MSMEG_3861 | MSMEG_3860 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Polyprenol-monophosphomannose synthase Ppm1; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation. Can transfer a number of fatty acids (C16 and C19, palmitic and probably tuberculostearic acids respectively are shown). Enhances the polyprenol monophosphomannose (PPM) synthase activity of Ppm1 (AC A0QZ12) without itself having PPM synthase catalytic activity. | 0.916 |
| ABK73064.1 | ppm1 | MSMEG_3861 | MSMEG_3859 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Glycosyl transferase, group 2 family protein; Transfers mannose from GDP-mannose to lipid acceptors to form polyprenol monophosphomannose (PPM); catalytic activity in vitro is enhanced by Lnt (AC A0QZ13). PMM is an alkai-stable sugar donor which adds mannose-phosphate residues to triacylated-PIM2, eventually leading to generation of the cell wall glycolipid lipoglycan modulins lipoarabinomannan (LAM) and lipomannan (LM) (By similarity). | 0.905 |
| ABK73071.1 | ABK73064.1 | MSMEG_3045 | MSMEG_3861 | Integral membrane protein. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.653 |
| ABK73071.1 | ABK75296.1 | MSMEG_3045 | MSMEG_2665 | Integral membrane protein. | Conserved hypothetical protein. | 0.775 |
| ABK73071.1 | ABK75821.1 | MSMEG_3045 | MSMEG_1671 | Integral membrane protein. | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | 0.774 |
| ABK73409.1 | ABK70051.1 | MSMEG_3862 | MSMEG_3863 | FxsA cytoplasmic membrane protein; Identified by match to protein family HMM PF04186. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.631 |
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