Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70290.1 | ABK71792.1 | MSMEG_3869 | MSMEG_3866 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.896 |
ABK70290.1 | ABK73214.1 | MSMEG_3869 | MSMEG_3867 | Conserved hypothetical protein. | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.898 |
ABK70290.1 | ABK73397.1 | MSMEG_3869 | MSMEG_5694 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.551 |
ABK70290.1 | ABK74564.1 | MSMEG_3869 | MSMEG_2225 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | 0.535 |
ABK70290.1 | ABK74651.1 | MSMEG_3869 | MSMEG_6902 | Conserved hypothetical protein. | Putative membrane protein; Identified by match to protein family HMM PF08044. | 0.582 |
ABK70290.1 | ABK74724.1 | MSMEG_3869 | MSMEG_3868 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.909 |
ABK70290.1 | ABK74758.1 | MSMEG_3869 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.589 |
ABK70290.1 | ABK75482.1 | MSMEG_3869 | MSMEG_3870 | Conserved hypothetical protein. | Alpha-ketoglutarate-dependent taurine dioxygenase; Identified by match to protein family HMM PF02668. | 0.547 |
ABK70290.1 | ABK76137.1 | MSMEG_3869 | MSMEG_3179 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.612 |
ABK70290.1 | cobG | MSMEG_3869 | MSMEG_3871 | Conserved hypothetical protein. | precorrin-3B synthase; Identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435. | 0.521 |
ABK71792.1 | ABK70290.1 | MSMEG_3866 | MSMEG_3869 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.896 |
ABK71792.1 | ABK73214.1 | MSMEG_3866 | MSMEG_3867 | Conserved hypothetical protein. | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.896 |
ABK71792.1 | ABK74724.1 | MSMEG_3866 | MSMEG_3868 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.897 |
ABK71792.1 | ABK75482.1 | MSMEG_3866 | MSMEG_3870 | Conserved hypothetical protein. | Alpha-ketoglutarate-dependent taurine dioxygenase; Identified by match to protein family HMM PF02668. | 0.550 |
ABK71792.1 | cobG | MSMEG_3866 | MSMEG_3871 | Conserved hypothetical protein. | precorrin-3B synthase; Identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435. | 0.511 |
ABK73214.1 | ABK70290.1 | MSMEG_3867 | MSMEG_3869 | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.898 |
ABK73214.1 | ABK71792.1 | MSMEG_3867 | MSMEG_3866 | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.896 |
ABK73214.1 | ABK74724.1 | MSMEG_3867 | MSMEG_3868 | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.896 |
ABK73214.1 | ABK75482.1 | MSMEG_3867 | MSMEG_3870 | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | Alpha-ketoglutarate-dependent taurine dioxygenase; Identified by match to protein family HMM PF02668. | 0.546 |
ABK73214.1 | cobG | MSMEG_3867 | MSMEG_3871 | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | precorrin-3B synthase; Identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435. | 0.539 |
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