STRINGSTRING
ABK75482.1 ABK75482.1 ABK71800.1 ABK71800.1 ABK72768.1 ABK72768.1 cobG cobG ABK70641.1 ABK70641.1 ABK72513.1 ABK72513.1 ABK69800.1 ABK69800.1 mps2 mps2 ABK74633.1 ABK74633.1 ABK72542.1 ABK72542.1 ABK73432.1 ABK73432.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75482.1Alpha-ketoglutarate-dependent taurine dioxygenase; Identified by match to protein family HMM PF02668. (299 aa)    
Predicted Functional Partners:
ABK71800.1
Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00440.
  
  
 0.812
ABK72768.1
ABC transporter component A.
 
  
 0.771
cobG
precorrin-3B synthase; Identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435.
 
  
 0.770
ABK70641.1
precorrin-8X methylmutase; Identified by match to protein family HMM PF02570.
  
    0.710
ABK72513.1
Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family.
  
    0.708
ABK69800.1
Linear gramicidin synthetase subunit C; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746.
 
  
 0.612
mps2
Linear gramicidin synthetase subunit D; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746.
 
  
 0.608
ABK74633.1
Extracellular solute-binding protein, family protein 3; Identified by match to protein family HMM PF04069.
 
  
 0.579
ABK72542.1
Piperideine-6-carboxylic acid dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
 0.564
ABK73432.1
Phosphotransferase enzyme family protein, putative; Identified by match to protein family HMM PF01636.
  
  
 0.562
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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