STRINGSTRING
cobG cobG ABK72513.1 ABK72513.1 ABK70641.1 ABK70641.1 cysNC cysNC cobA cobA cobL cobL ABK71848.1 ABK71848.1 ABK73736.1 ABK73736.1 cobK cobK cobN cobN ABK75482.1 ABK75482.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobGprecorrin-3B synthase; Identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435. (372 aa)    
Predicted Functional Partners:
ABK72513.1
Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family.
 
 
 0.998
ABK70641.1
precorrin-8X methylmutase; Identified by match to protein family HMM PF02570.
  
 0.992
cysNC
Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.961
cobA
uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470.
  
  
 0.882
cobL
precorrin-6Y C5,15-methyltransferase (decarboxylating); Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469.
 
  
 0.835
ABK71848.1
N5,N10-methylene- tetrahydromethanopterin reductase; Identified by match to protein family HMM PF00296.
   
  
 0.827
ABK73736.1
Flavin-binding monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992.
   
  
 0.820
cobK
Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715.
 
  
 0.802
cobN
Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257.
 
   
 0.785
ABK75482.1
Alpha-ketoglutarate-dependent taurine dioxygenase; Identified by match to protein family HMM PF02668.
 
  
 0.770
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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