Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70063.1 | ABK70610.1 | MSMEG_4969 | MSMEG_5241 | Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545. | GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. | 0.876 |
| ABK70063.1 | ABK73602.1 | MSMEG_4969 | MSMEG_3934 | Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.543 |
| ABK70063.1 | ABK74175.1 | MSMEG_4969 | MSMEG_3926 | Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545. | Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494. | 0.710 |
| ABK70063.1 | ABK75395.1 | MSMEG_4969 | MSMEG_3942 | Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545. | Conserved hypothetical protein. | 0.428 |
| ABK70610.1 | ABK70063.1 | MSMEG_5241 | MSMEG_4969 | GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. | Two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545. | 0.876 |
| ABK70610.1 | ABK73602.1 | MSMEG_5241 | MSMEG_3934 | GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.460 |
| ABK70610.1 | ABK74175.1 | MSMEG_5241 | MSMEG_3926 | GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. | Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494. | 0.718 |
| ABK70610.1 | ABK74930.1 | MSMEG_5241 | MSMEG_3932 | GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. | 14 kDa antigen; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.523 |
| ABK70610.1 | ABK75395.1 | MSMEG_5241 | MSMEG_3942 | GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. | Conserved hypothetical protein. | 0.913 |
| ABK71901.1 | ABK73021.1 | MSMEG_3930 | MSMEG_3931 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | 0.996 |
| ABK71901.1 | ABK73602.1 | MSMEG_3930 | MSMEG_3934 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.507 |
| ABK71901.1 | ABK74175.1 | MSMEG_3930 | MSMEG_3926 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494. | 0.823 |
| ABK71901.1 | ABK74930.1 | MSMEG_3930 | MSMEG_3932 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | 14 kDa antigen; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.729 |
| ABK71901.1 | ABK75673.1 | MSMEG_3930 | MSMEG_3927 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. | 0.976 |
| ABK71901.1 | ABK76036.1 | MSMEG_3930 | MSMEG_3928 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | [NiFe] hydrogenase, alpha subunit, putative; Identified by match to protein family HMM PF00374. | 0.978 |
| ABK71901.1 | saeC | MSMEG_3930 | MSMEG_0046 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.456 |
| ABK73021.1 | ABK71901.1 | MSMEG_3931 | MSMEG_3930 | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | 0.996 |
| ABK73021.1 | ABK73602.1 | MSMEG_3931 | MSMEG_3934 | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.507 |
| ABK73021.1 | ABK74175.1 | MSMEG_3931 | MSMEG_3926 | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494. | 0.696 |
| ABK73021.1 | ABK74930.1 | MSMEG_3931 | MSMEG_3932 | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | 14 kDa antigen; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.727 |
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