STRINGSTRING
ABK75673.1 ABK75673.1 ABK76036.1 ABK76036.1 ABK69913.1 ABK69913.1 ABK71901.1 ABK71901.1 ABK73021.1 ABK73021.1 hypC hypC hypD hypD hypE hypE hybC hybC ABK74930.1 ABK74930.1 hypE-2 hypE-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75673.1Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. (155 aa)    
Predicted Functional Partners:
ABK76036.1
[NiFe] hydrogenase, alpha subunit, putative; Identified by match to protein family HMM PF00374.
 
  
 0.981
ABK69913.1
[NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058.
 
  
 0.981
ABK71901.1
[NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175.
 
    0.976
ABK73021.1
[NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037.
 
  
 0.975
hypC
Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074.
 
  
 0.771
hypD
Hydrogenase expression/formation protein HypD; Identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075.
 
  
 0.742
hypE
Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124.
 
  
 0.719
hybC
Hydrogenase-2, large subunit; Identified by match to protein family HMM PF00374.
  
 
 0.709
ABK74930.1
14 kDa antigen; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family.
  
    0.703
hypE-2
Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124.
 
  
 0.700
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (26%) [HD]