Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69767.1 | ABK69913.1 | MSMEG_5265 | MSMEG_3929 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | 0.901 |
| ABK69767.1 | ABK74127.1 | MSMEG_5265 | MSMEG_4527 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.974 |
| ABK69767.1 | ABK74603.1 | MSMEG_5265 | MSMEG_6203 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | Cysteine synthase/cystathionine beta-synthase family protein; Identified by match to protein family HMM PF00291. | 0.970 |
| ABK69767.1 | ABK74613.1 | MSMEG_5265 | MSMEG_2094 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | 56kDa selenium binding protein; Identified by match to protein family HMM PF05694. | 0.906 |
| ABK69767.1 | ABK76036.1 | MSMEG_5265 | MSMEG_3928 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | [NiFe] hydrogenase, alpha subunit, putative; Identified by match to protein family HMM PF00374. | 0.901 |
| ABK69767.1 | metZ | MSMEG_5265 | MSMEG_0769 | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.919 |
| ABK69913.1 | ABK69767.1 | MSMEG_3929 | MSMEG_5265 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | Putative cystathionine gamma-synthase; Identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212. | 0.901 |
| ABK69913.1 | ABK71901.1 | MSMEG_3929 | MSMEG_3930 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | 0.978 |
| ABK69913.1 | ABK73021.1 | MSMEG_3929 | MSMEG_3931 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | 0.976 |
| ABK69913.1 | ABK74127.1 | MSMEG_3929 | MSMEG_4527 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.900 |
| ABK69913.1 | ABK74603.1 | MSMEG_3929 | MSMEG_6203 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | Cysteine synthase/cystathionine beta-synthase family protein; Identified by match to protein family HMM PF00291. | 0.901 |
| ABK69913.1 | ABK74613.1 | MSMEG_3929 | MSMEG_2094 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | 56kDa selenium binding protein; Identified by match to protein family HMM PF05694. | 0.901 |
| ABK69913.1 | ABK75673.1 | MSMEG_3929 | MSMEG_3927 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. | 0.981 |
| ABK69913.1 | ABK76036.1 | MSMEG_3929 | MSMEG_3928 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | [NiFe] hydrogenase, alpha subunit, putative; Identified by match to protein family HMM PF00374. | 0.999 |
| ABK69913.1 | hybC | MSMEG_3929 | MSMEG_2263 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | Hydrogenase-2, large subunit; Identified by match to protein family HMM PF00374. | 0.850 |
| ABK69913.1 | metZ | MSMEG_3929 | MSMEG_0769 | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.901 |
| ABK71901.1 | ABK69913.1 | MSMEG_3930 | MSMEG_3929 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | [NiFe] hydrogenase, delta subunit, putative; Identified by match to protein family HMM PF01058. | 0.978 |
| ABK71901.1 | ABK73021.1 | MSMEG_3930 | MSMEG_3931 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | [NiFe] hydrogenase, beta subunit, putative; Identified by match to protein family HMM PF00037. | 0.996 |
| ABK71901.1 | ABK75673.1 | MSMEG_3930 | MSMEG_3927 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. | 0.976 |
| ABK71901.1 | ABK76036.1 | MSMEG_3930 | MSMEG_3928 | [NiFe] hydrogenase, gamma subunit, putative; Identified by match to protein family HMM PF00175. | [NiFe] hydrogenase, alpha subunit, putative; Identified by match to protein family HMM PF00374. | 0.978 |
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