ABK71658.1 protein (Mycolicibacterium smegmatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ABK71658.1

6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family. (332 aa)

Predicted Functional Partners:

ABK70442.1

0.995

ABK74411.1

0.901

ABK69530.1

0.846

ABK70297.1

0.776

ABK73984.1

0.774

ABK70972.1

0.765

ABK72812.1

0.750

ABK71329.1

0.735

ABK72910.1

0.729

ABK74941.1

0.720

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69530.1	ABK70442.1	MSMEG_5577	MSMEG_0085	Fructokinase; Identified by match to protein family HMM PF00294.	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	0.942
ABK69530.1	ABK71658.1	MSMEG_5577	MSMEG_3947	Fructokinase; Identified by match to protein family HMM PF00294.	6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.	0.846
ABK69530.1	ABK73984.1	MSMEG_5577	MSMEG_1375	Fructokinase; Identified by match to protein family HMM PF00294.	Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167.	0.401
ABK70297.1	ABK70442.1	MSMEG_1377	MSMEG_0085	DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	0.948
ABK70297.1	ABK71658.1	MSMEG_1377	MSMEG_3947	DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.	0.776
ABK70297.1	ABK73984.1	MSMEG_1377	MSMEG_1375	DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167.	0.708
ABK70297.1	ABK74411.1	MSMEG_1377	MSMEG_2121	DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.	0.519
ABK70442.1	ABK69530.1	MSMEG_0085	MSMEG_5577	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Fructokinase; Identified by match to protein family HMM PF00294.	0.942
ABK70442.1	ABK70297.1	MSMEG_0085	MSMEG_1377	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	0.948
ABK70442.1	ABK70972.1	MSMEG_0085	MSMEG_0087	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Glucitol operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	0.989
ABK70442.1	ABK71329.1	MSMEG_0085	MSMEG_5142	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Identified by match to protein family HMM PF00232.	0.750
ABK70442.1	ABK71658.1	MSMEG_0085	MSMEG_3947	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.	0.995
ABK70442.1	ABK72812.1	MSMEG_0085	MSMEG_0503	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	0.916
ABK70442.1	ABK72910.1	MSMEG_0085	MSMEG_3115	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Regulatory protein, DeoR; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	0.921
ABK70442.1	ABK73984.1	MSMEG_0085	MSMEG_1375	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167.	0.984
ABK70442.1	ABK74411.1	MSMEG_0085	MSMEG_2121	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.	0.999
ABK70442.1	ABK74941.1	MSMEG_0085	MSMEG_0509	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	Transcriptional regulatory protein; Identified by match to protein family HMM PF00455; match to protein family HMM PF01022; match to protein family HMM PF08220.	0.919
ABK70972.1	ABK70442.1	MSMEG_0087	MSMEG_0085	Glucitol operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.	0.989
ABK70972.1	ABK71658.1	MSMEG_0087	MSMEG_3947	Glucitol operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.	0.765
ABK70972.1	ABK74411.1	MSMEG_0087	MSMEG_2121	Glucitol operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.	Multiphosphoryl transfer protein (MTP); Identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; Belongs to the PEP-utilizing enzyme family.	0.535

page 1 of 3

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Databases

Cooccurrence

Textmining

Coexpression

Experiments

Fusion

© STRING Consortium 2023

Credits

Access

Info

About