Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69614.1 | ABK70194.1 | MSMEG_5373 | MSMEG_4165 | Nitrilase 2; Identified by match to protein family HMM PF00795. | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.919 |
| ABK69614.1 | ABK70993.1 | MSMEG_5373 | MSMEG_4138 | Nitrilase 2; Identified by match to protein family HMM PF00795. | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | 0.925 |
| ABK69614.1 | ABK71479.1 | MSMEG_5373 | MSMEG_1120 | Nitrilase 2; Identified by match to protein family HMM PF00795. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795. | 0.906 |
| ABK69614.1 | ABK72052.1 | MSMEG_5373 | MSMEG_3970 | Nitrilase 2; Identified by match to protein family HMM PF00795. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.911 |
| ABK69614.1 | ABK72826.1 | MSMEG_5373 | MSMEG_0377 | Nitrilase 2; Identified by match to protein family HMM PF00795. | Nitrile hydratase. | 0.906 |
| ABK69614.1 | acyP | MSMEG_5373 | MSMEG_2422 | Nitrilase 2; Identified by match to protein family HMM PF00795. | Acylphosphatase; Identified by match to protein family HMM PF00708. | 0.903 |
| ABK69614.1 | nthA | MSMEG_5373 | MSMEG_0378 | Nitrilase 2; Identified by match to protein family HMM PF00795. | Nitrile hydratase, alpha subunit; Identified by match to protein family HMM PF02979; match to protein family HMM TIGR01323. | 0.907 |
| ABK69614.1 | speB-2 | MSMEG_5373 | MSMEG_3535 | Nitrilase 2; Identified by match to protein family HMM PF00795. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.534 |
| ABK70194.1 | ABK69614.1 | MSMEG_4165 | MSMEG_5373 | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Nitrilase 2; Identified by match to protein family HMM PF00795. | 0.919 |
| ABK70194.1 | ABK70993.1 | MSMEG_4165 | MSMEG_4138 | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | 0.920 |
| ABK70194.1 | ABK71479.1 | MSMEG_4165 | MSMEG_1120 | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795. | 0.920 |
| ABK70194.1 | ABK72052.1 | MSMEG_4165 | MSMEG_3970 | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.916 |
| ABK70194.1 | acyP | MSMEG_4165 | MSMEG_2422 | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | Acylphosphatase; Identified by match to protein family HMM PF00708. | 0.909 |
| ABK70993.1 | ABK69614.1 | MSMEG_4138 | MSMEG_5373 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | Nitrilase 2; Identified by match to protein family HMM PF00795. | 0.925 |
| ABK70993.1 | ABK70194.1 | MSMEG_4138 | MSMEG_4165 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | [NAD+] benzaldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. | 0.920 |
| ABK70993.1 | ABK71479.1 | MSMEG_4138 | MSMEG_1120 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795. | 0.923 |
| ABK70993.1 | ABK72052.1 | MSMEG_4138 | MSMEG_3970 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425; Belongs to the amidase family. | 0.910 |
| ABK70993.1 | ABK72826.1 | MSMEG_4138 | MSMEG_0377 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | Nitrile hydratase. | 0.905 |
| ABK70993.1 | acyP | MSMEG_4138 | MSMEG_2422 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | Acylphosphatase; Identified by match to protein family HMM PF00708. | 0.903 |
| ABK70993.1 | nthA | MSMEG_4138 | MSMEG_0378 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | Nitrile hydratase, alpha subunit; Identified by match to protein family HMM PF02979; match to protein family HMM TIGR01323. | 0.906 |
page 1 of 3