STRINGSTRING
ABK74098.1 ABK74098.1 ABK70959.1 ABK70959.1 ABK71729.1 ABK71729.1 ABK72626.1 ABK72626.1 ABK72067.1 ABK72067.1 ABK74218.1 ABK74218.1 ABK71617.1 ABK71617.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK74098.1Putative transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. (425 aa)    
Predicted Functional Partners:
ABK70959.1
Cyclase; Identified by match to protein family HMM PF04199.
  
    0.789
ABK71729.1
Peptidase M20D, amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891.
  
    0.784
ABK72626.1
Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037.
 
    0.612
ABK72067.1
FMN-dependent dehydrogenase; Identified by match to protein family HMM PF01070.
  
  
 0.411
ABK74218.1
Lactate 2-monooxygenase; Identified by match to protein family HMM PF01070.
  
  
 0.411
ABK71617.1
Lactate 2-monooxygenase; Identified by match to protein family HMM PF01070.
  
  
 0.403
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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