STRINGSTRING
ABK74822.1 ABK74822.1 ABK74744.1 ABK74744.1 ABK71090.1 ABK71090.1 ABK70442.1 ABK70442.1 ABK71751.1 ABK71751.1 ABK75059.1 ABK75059.1 ABK74773.1 ABK74773.1 ABK74983.1 ABK74983.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74822.1Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. (458 aa)    
Predicted Functional Partners:
ABK74744.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
  
    0.525
ABK71090.1
Asp/Glu racemase; Identified by match to protein family HMM PF01177.
  
    0.485
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
  
  
 0.452
ABK71751.1
HAD-superfamily protein hydrolase subfamily protein IA, variant 3, putative; Identified by match to protein family HMM PF00702.
  
  
 0.444
ABK75059.1
Phosphatase YfbT; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
  
  
 0.439
ABK74773.1
Phosphoglycolate phosphatase, chromosomal; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
  
  
 0.437
ABK74983.1
Conserved hypothetical protein.
  
  
 0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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