Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70442.1 | ABK74822.1 | MSMEG_0085 | MSMEG_3992 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.452 |
ABK71090.1 | ABK74744.1 | MSMEG_3993 | MSMEG_3994 | Asp/Glu racemase; Identified by match to protein family HMM PF01177. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106. | 0.779 |
ABK71090.1 | ABK74822.1 | MSMEG_3993 | MSMEG_3992 | Asp/Glu racemase; Identified by match to protein family HMM PF01177. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.485 |
ABK71751.1 | ABK74822.1 | MSMEG_1495 | MSMEG_3992 | HAD-superfamily protein hydrolase subfamily protein IA, variant 3, putative; Identified by match to protein family HMM PF00702. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.444 |
ABK74744.1 | ABK71090.1 | MSMEG_3994 | MSMEG_3993 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Asp/Glu racemase; Identified by match to protein family HMM PF01177. | 0.779 |
ABK74744.1 | ABK74822.1 | MSMEG_3994 | MSMEG_3992 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.525 |
ABK74773.1 | ABK74822.1 | MSMEG_4183 | MSMEG_3992 | Phosphoglycolate phosphatase, chromosomal; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.437 |
ABK74822.1 | ABK70442.1 | MSMEG_3992 | MSMEG_0085 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.452 |
ABK74822.1 | ABK71090.1 | MSMEG_3992 | MSMEG_3993 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Asp/Glu racemase; Identified by match to protein family HMM PF01177. | 0.485 |
ABK74822.1 | ABK71751.1 | MSMEG_3992 | MSMEG_1495 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | HAD-superfamily protein hydrolase subfamily protein IA, variant 3, putative; Identified by match to protein family HMM PF00702. | 0.444 |
ABK74822.1 | ABK74744.1 | MSMEG_3992 | MSMEG_3994 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106. | 0.525 |
ABK74822.1 | ABK74773.1 | MSMEG_3992 | MSMEG_4183 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Phosphoglycolate phosphatase, chromosomal; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. | 0.437 |
ABK74822.1 | ABK74983.1 | MSMEG_3992 | MSMEG_2958 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.402 |
ABK74822.1 | ABK75059.1 | MSMEG_3992 | MSMEG_1707 | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Phosphatase YfbT; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. | 0.439 |
ABK74983.1 | ABK74822.1 | MSMEG_2958 | MSMEG_3992 | Conserved hypothetical protein. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.402 |
ABK75059.1 | ABK74822.1 | MSMEG_1707 | MSMEG_3992 | Phosphatase YfbT; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. | Integral membrane transport protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.439 |