Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71860.1 | ABK73434.1 | MSMEG_6281 | MSMEG_3997 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Regulatory protein. | 0.408 |
ABK73215.1 | ABK73434.1 | MSMEG_4014 | MSMEG_3997 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | Regulatory protein. | 0.402 |
ABK73215.1 | hydA-2 | MSMEG_4014 | MSMEG_3996 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033. | 0.941 |
ABK73434.1 | ABK71860.1 | MSMEG_3997 | MSMEG_6281 | Regulatory protein. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.408 |
ABK73434.1 | ABK73215.1 | MSMEG_3997 | MSMEG_4014 | Regulatory protein. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.402 |
ABK73434.1 | ABK75477.1 | MSMEG_3997 | MSMEG_3995 | Regulatory protein. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.611 |
ABK73434.1 | hydA-2 | MSMEG_3997 | MSMEG_3996 | Regulatory protein. | Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033. | 0.533 |
ABK75477.1 | ABK73434.1 | MSMEG_3995 | MSMEG_3997 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | Regulatory protein. | 0.611 |
ABK75477.1 | hydA-2 | MSMEG_3995 | MSMEG_3996 | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033. | 0.977 |
hydA-2 | ABK73215.1 | MSMEG_3996 | MSMEG_4014 | Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.941 |
hydA-2 | ABK73434.1 | MSMEG_3996 | MSMEG_3997 | Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033. | Regulatory protein. | 0.533 |
hydA-2 | ABK75477.1 | MSMEG_3996 | MSMEG_3995 | Dihydropyrimidinase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033. | N-carbamoyl-L-amino acid amidohydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879. | 0.977 |