node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70001.1 | ABK70067.1 | MSMEG_4020 | MSMEG_4021 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
ABK70001.1 | ABK70529.1 | MSMEG_4020 | MSMEG_6767 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 0.569 |
ABK70001.1 | ABK71774.1 | MSMEG_4020 | MSMEG_6392 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.460 |
ABK70001.1 | ABK72659.1 | MSMEG_4020 | MSMEG_4019 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | 0.841 |
ABK70001.1 | pks | MSMEG_4020 | MSMEG_0408 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.607 |
ABK70001.1 | pks5 | MSMEG_4020 | MSMEG_4727 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis. | 0.483 |
ABK70067.1 | ABK70001.1 | MSMEG_4021 | MSMEG_4020 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.776 |
ABK70067.1 | ABK72659.1 | MSMEG_4021 | MSMEG_4019 | Hypothetical protein; Identified by Glimmer2; putative. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | 0.778 |
ABK70529.1 | ABK70001.1 | MSMEG_6767 | MSMEG_4020 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.569 |
ABK70529.1 | ABK70948.1 | MSMEG_6767 | MSMEG_0718 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.478 |
ABK70529.1 | ABK71774.1 | MSMEG_6767 | MSMEG_6392 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.964 |
ABK70529.1 | ABK72398.1 | MSMEG_6767 | MSMEG_0019 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733. | 0.997 |
ABK70529.1 | ABK72659.1 | MSMEG_6767 | MSMEG_4019 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | 0.691 |
ABK70529.1 | pks | MSMEG_6767 | MSMEG_0408 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.966 |
ABK70529.1 | pks5 | MSMEG_6767 | MSMEG_4727 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis. | 0.903 |
ABK70529.1 | rplF | MSMEG_6767 | MSMEG_1470 | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.411 |
ABK70948.1 | ABK70529.1 | MSMEG_0718 | MSMEG_6767 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801. | 0.478 |
ABK70948.1 | ABK72659.1 | MSMEG_0718 | MSMEG_4019 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501. | 0.632 |
ABK70948.1 | ABK73027.1 | MSMEG_0718 | MSMEG_3986 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501. | 0.937 |
ABK70948.1 | pks | MSMEG_0718 | MSMEG_0408 | acetyl-CoA synthetase; Identified by match to protein family HMM PF00501. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.503 |