STRINGSTRING
ABK75187.1 ABK75187.1 ABK73709.1 ABK73709.1 ABK73875.1 ABK73875.1 ABK70822.1 ABK70822.1 ABK71774.1 ABK71774.1 ABK71453.1 ABK71453.1 pks pks ABK70529.1 ABK70529.1 ABK75467.1 ABK75467.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75187.1Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107. (324 aa)    
Predicted Functional Partners:
ABK73709.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993.
 
 0.621
ABK73875.1
Alcohol dehydrogenase, zinc-binding; Identified by match to protein family HMM PF00107.
  
     0.605
ABK70822.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
       0.536
ABK71774.1
Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.
  
 
 0.453
ABK71453.1
Dehydrogenase; Identified by match to protein family HMM PF00107.
 
  
 0.451
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
  
 
0.448
ABK70529.1
Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.
  
 
 0.448
ABK75467.1
Polyketide synthetase mbtd; Identified by match to protein family HMM PF00106; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370.
  
 
 0.414
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]